Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.38□□□□□ -2.03
LTBRP36941 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.38□□□□□ -2.03
LTBRP36941 SNORA31.25-201ENST00000517242 134 ntBASIC2.38□□□□□ -2.03
LTBRP36941 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.38□□□□□ -2.03
LTBRP36941 AL359881.1-201ENST00000602916 267 ntBASIC2.38□□□□□ -2.03
LTBRP36941 U1.36-201ENST00000620684 176 ntBASIC2.38□□□□□ -2.03
LTBRP36941 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.38□□□□□ -2.03
LTBRP36941 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LTBRP36941 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.37□□□□□ -2.03
LTBRP36941 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LTBRP36941 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
LTBRP36941 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
LTBRP36941 RNU6-112P-201ENST00000363599 104 ntBASIC2.37□□□□□ -2.03
LTBRP36941 Y_RNA.466-201ENST00000384294 113 ntBASIC2.37□□□□□ -2.03
LTBRP36941 Y_RNA.547-201ENST00000384654 119 ntBASIC2.37□□□□□ -2.03
LTBRP36941 RNA5SP450-201ENST00000411206 102 ntBASIC2.37□□□□□ -2.03
LTBRP36941 RNU7-107P-201ENST00000459121 61 ntBASIC2.37□□□□□ -2.03
LTBRP36941 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.37□□□□□ -2.03
LTBRP36941 AC004486.1-201ENST00000546846 233 ntBASIC2.37□□□□□ -2.03
LTBRP36941 MIR4529-201ENST00000578110 78 ntBASIC2.37□□□□□ -2.03
LTBRP36941 AC134878.1-201ENST00000619901 243 ntBASIC2.37□□□□□ -2.03
LTBRP36941 FO624990.1-201ENST00000636373 85 ntBASIC2.37□□□□□ -2.03
LTBRP36941 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.37□□□□□ -2.03
LTBRP36941 MTND5P32-201ENST00000560711 1802 ntBASIC2.37□□□□□ -2.03
LTBRP36941 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LTBRP36941 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
LTBRP36941 RNU6-508P-201ENST00000363231 103 ntBASIC2.36□□□□□ -2.03
LTBRP36941 RNU6-309P-201ENST00000364573 106 ntBASIC2.36□□□□□ -2.03
LTBRP36941 RNU6-296P-201ENST00000384608 107 ntBASIC2.36□□□□□ -2.03
LTBRP36941 RNU6-1031P-201ENST00000384773 107 ntBASIC2.36□□□□□ -2.03
LTBRP36941 U8.16-201ENST00000391279 133 ntBASIC2.36□□□□□ -2.03
LTBRP36941 MIR1287-201ENST00000408492 90 ntBASIC2.36□□□□□ -2.03
LTBRP36941 MTATP6P21-201ENST00000440681 189 ntBASIC2.36□□□□□ -2.03
LTBRP36941 RNU7-34P-201ENST00000459394 64 ntBASIC2.36□□□□□ -2.03
LTBRP36941 RNA5SP76-201ENST00000516277 87 ntBASIC2.36□□□□□ -2.03
LTBRP36941 RNU6-659P-201ENST00000516454 104 ntBASIC2.36□□□□□ -2.03
LTBRP36941 RNA5SP168-201ENST00000516642 112 ntBASIC2.36□□□□□ -2.03
LTBRP36941 AC090049.2-201ENST00000550377 109 ntBASIC2.36□□□□□ -2.03
LTBRP36941 MIR3121-201ENST00000579680 77 ntBASIC2.36□□□□□ -2.03
LTBRP36941 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.36□□□□□ -2.03
LTBRP36941 AC015726.2-201ENST00000620112 122 ntBASIC2.36□□□□□ -2.03
LTBRP36941 AC027279.3-201ENST00000625055 122 ntBASIC2.36□□□□□ -2.03
LTBRP36941 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LTBRP36941 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
LTBRP36941 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LTBRP36941 Y_RNA.114-201ENST00000363265 113 ntBASIC2.35□□□□□ -2.03
LTBRP36941 SNORD115-28-201ENST00000363931 81 ntBASIC2.35□□□□□ -2.03
LTBRP36941 RNU6-424P-201ENST00000384367 105 ntBASIC2.35□□□□□ -2.03
LTBRP36941 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.35□□□□□ -2.03
LTBRP36941 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.35□□□□□ -2.03
LTBRP36941 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.35□□□□□ -2.03
LTBRP36941 RN7SKP179-201ENST00000516126 217 ntBASIC2.35□□□□□ -2.03
LTBRP36941 RNU6-1149P-201ENST00000516810 97 ntBASIC2.35□□□□□ -2.03
LTBRP36941 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.35□□□□□ -2.03
LTBRP36941 MIR4709-201ENST00000577272 72 ntBASIC2.35□□□□□ -2.03
LTBRP36941 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.35□□□□□ -2.03
LTBRP36941 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LTBRP36941 Y_RNA.410-201ENST00000383992 113 ntBASIC2.34□□□□□ -2.03
LTBRP36941 SNORD38C-201ENST00000384381 69 ntBASIC2.34□□□□□ -2.03
LTBRP36941 Y_RNA.525-201ENST00000384570 113 ntBASIC2.34□□□□□ -2.03
LTBRP36941 AL445646.1-201ENST00000431784 216 ntBASIC2.34□□□□□ -2.03
LTBRP36941 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.34□□□□□ -2.03
LTBRP36941 AL158147.1-201ENST00000443970 75 ntBASIC2.34□□□□□ -2.03
LTBRP36941 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
LTBRP36941 RNU6-1053P-201ENST00000515930 101 ntBASIC2.34□□□□□ -2.03
LTBRP36941 SCARNA16.3-201ENST00000516595 184 ntBASIC2.34□□□□□ -2.03
LTBRP36941 RNA5SP481-201ENST00000516814 122 ntBASIC2.34□□□□□ -2.03
LTBRP36941 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.34□□□□□ -2.03
LTBRP36941 AL022345.2-201ENST00000606307 135 ntBASIC2.34□□□□□ -2.03
LTBRP36941 MIR6845-201ENST00000613182 61 ntBASIC2.34□□□□□ -2.03
LTBRP36941 MIR376A2-201ENST00000636782 80 ntBASIC2.34□□□□□ -2.03
LTBRP36941 Y_RNA.37-201ENST00000362606 108 ntBASIC2.33□□□□□ -2.04
LTBRP36941 RNU6-1189P-201ENST00000383958 107 ntBASIC2.33□□□□□ -2.04
LTBRP36941 Y_RNA.629-201ENST00000411368 105 ntBASIC2.33□□□□□ -2.04
LTBRP36941 AC108729.3-201ENST00000513484 108 ntBASIC2.33□□□□□ -2.04
LTBRP36941 RNU7-12P-201ENST00000516030 62 ntBASIC2.33□□□□□ -2.04
LTBRP36941 MIR5197-201ENST00000583721 112 ntBASIC2.33□□□□□ -2.04
LTBRP36941 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.33□□□□□ -2.04
LTBRP36941 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LTBRP36941 Y_RNA.280-201ENST00000364765 112 ntBASIC2.32□□□□□ -2.04
LTBRP36941 snoU13.27-201ENST00000459278 104 ntBASIC2.32□□□□□ -2.04
LTBRP36941 RNA5SP236-201ENST00000516169 116 ntBASIC2.32□□□□□ -2.04
LTBRP36941 MIR5194-201ENST00000582634 120 ntBASIC2.32□□□□□ -2.04
LTBRP36941 MIR4781-201ENST00000585250 76 ntBASIC2.32□□□□□ -2.04
LTBRP36941 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.32□□□□□ -2.04
LTBRP36941 MIR6733-201ENST00000635723 61 ntBASIC2.32□□□□□ -2.04
LTBRP36941 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
LTBRP36941 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LTBRP36941 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LTBRP36941 MIR21-201ENST00000362134 72 ntBASIC2.31□□□□□ -2.04
LTBRP36941 RNU6-833P-201ENST00000363486 107 ntBASIC2.31□□□□□ -2.04
LTBRP36941 Y_RNA.508-201ENST00000384502 114 ntBASIC2.31□□□□□ -2.04
LTBRP36941 RNA5SP100-201ENST00000410903 110 ntBASIC2.31□□□□□ -2.04
LTBRP36941 RNA5SP59-201ENST00000410922 110 ntBASIC2.31□□□□□ -2.04
LTBRP36941 Y_RNA.651-201ENST00000459380 103 ntBASIC2.31□□□□□ -2.04
LTBRP36941 RNU6-772P-201ENST00000516042 105 ntBASIC2.31□□□□□ -2.04
LTBRP36941 SNORD36C-201ENST00000516733 66 ntBASIC2.31□□□□□ -2.04
LTBRP36941 RNU6-826P-201ENST00000516827 104 ntBASIC2.31□□□□□ -2.04
LTBRP36941 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.31□□□□□ -2.04
LTBRP36941 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms