Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RNU6-1048P-201ENST00000364054 107 ntBASIC1.62□□□□□ -2.15
KRT9P35527 Y_RNA.272-201ENST00000364696 102 ntBASIC1.62□□□□□ -2.15
KRT9P35527 Y_RNA.310-201ENST00000365063 113 ntBASIC1.62□□□□□ -2.15
KRT9P35527 Y_RNA.441-201ENST00000384123 112 ntBASIC1.62□□□□□ -2.15
KRT9P35527 RNA5SP511-201ENST00000410487 115 ntBASIC1.62□□□□□ -2.15
KRT9P35527 CALM2P4-201ENST00000430810 426 ntBASIC1.62□□□□□ -2.15
KRT9P35527 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.62□□□□□ -2.15
KRT9P35527 RNU7-200P-201ENST00000516105 62 ntBASIC1.62□□□□□ -2.15
KRT9P35527 RNU6-346P-201ENST00000516288 111 ntBASIC1.62□□□□□ -2.15
KRT9P35527 AC015720.1-201ENST00000565251 277 ntBASIC1.62□□□□□ -2.15
KRT9P35527 MIR4498-201ENST00000577599 66 ntBASIC1.62□□□□□ -2.15
KRT9P35527 AC004832.4-201ENST00000608952 331 ntBASIC1.62□□□□□ -2.15
KRT9P35527 Y_RNA.802-201ENST00000614892 130 ntBASIC1.62□□□□□ -2.15
KRT9P35527 AC132825.6-201ENST00000638861 357 ntBASIC1.62□□□□□ -2.15
KRT9P35527 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
KRT9P35527 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.61□□□□□ -2.15
KRT9P35527 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
KRT9P35527 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
KRT9P35527 Y_RNA.24-201ENST00000362508 103 ntBASIC1.61□□□□□ -2.15
KRT9P35527 Y_RNA.75-201ENST00000362927 97 ntBASIC1.61□□□□□ -2.15
KRT9P35527 RNU1-42P-201ENST00000364033 160 ntBASIC1.61□□□□□ -2.15
KRT9P35527 RNU6-144P-201ENST00000383951 107 ntBASIC1.61□□□□□ -2.15
KRT9P35527 Y_RNA.398-201ENST00000383952 99 ntBASIC1.61□□□□□ -2.15
KRT9P35527 RNU6-424P-201ENST00000384367 105 ntBASIC1.61□□□□□ -2.15
KRT9P35527 MIR626-201ENST00000385032 94 ntBASIC1.61□□□□□ -2.15
KRT9P35527 MIR613-201ENST00000385248 95 ntBASIC1.61□□□□□ -2.15
KRT9P35527 BTF3P4-201ENST00000418852 495 ntBASIC1.61□□□□□ -2.15
KRT9P35527 AL606753.1-201ENST00000427435 87 ntBASIC1.61□□□□□ -2.15
KRT9P35527 AL162725.1-201ENST00000435405 301 ntBASIC1.61□□□□□ -2.15
KRT9P35527 TMSB4XP3-201ENST00000445144 114 ntBASIC1.61□□□□□ -2.15
KRT9P35527 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.61□□□□□ -2.15
KRT9P35527 RN7SKP164-201ENST00000516138 266 ntBASIC1.61□□□□□ -2.15
KRT9P35527 RNA5SP168-201ENST00000516642 112 ntBASIC1.61□□□□□ -2.15
KRT9P35527 AC100767.1-201ENST00000528178 123 ntBASIC1.61□□□□□ -2.15
KRT9P35527 AL358944.1-201ENST00000528537 144 ntBASIC1.61□□□□□ -2.15
KRT9P35527 AL512310.8-201ENST00000550183 120 ntBASIC1.61□□□□□ -2.15
KRT9P35527 MIR4778-201ENST00000577635 80 ntBASIC1.61□□□□□ -2.15
KRT9P35527 MTND1P7-201ENST00000632801 297 ntBASIC1.61□□□□□ -2.15
KRT9P35527 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
KRT9P35527 MIR378A-201ENST00000362177 66 ntBASIC1.6□□□□□ -2.15
KRT9P35527 Y_RNA.23-201ENST00000362496 106 ntBASIC1.6□□□□□ -2.15
KRT9P35527 RNU6-103P-201ENST00000363686 107 ntBASIC1.6□□□□□ -2.15
KRT9P35527 RNU4-10P-201ENST00000364383 140 ntBASIC1.6□□□□□ -2.15
KRT9P35527 RNU6-449P-201ENST00000383914 107 ntBASIC1.6□□□□□ -2.15
KRT9P35527 Y_RNA.412-201ENST00000384001 104 ntBASIC1.6□□□□□ -2.15
KRT9P35527 SNORD116-13-201ENST00000384408 92 ntBASIC1.6□□□□□ -2.15
KRT9P35527 SNORA67.6-201ENST00000391093 99 ntBASIC1.6□□□□□ -2.15
KRT9P35527 RNA5SP482-201ENST00000391269 118 ntBASIC1.6□□□□□ -2.15
KRT9P35527 U8.16-201ENST00000391279 133 ntBASIC1.6□□□□□ -2.15
KRT9P35527 RNU4-62P-201ENST00000410125 130 ntBASIC1.6□□□□□ -2.15
KRT9P35527 RNU7-141P-201ENST00000459304 62 ntBASIC1.6□□□□□ -2.15
KRT9P35527 MTND5P41-201ENST00000517498 206 ntBASIC1.6□□□□□ -2.15
KRT9P35527 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.6□□□□□ -2.15
KRT9P35527 MIR4744-201ENST00000581563 82 ntBASIC1.6□□□□□ -2.15
KRT9P35527 AC106754.2-201ENST00000623006 233 ntBASIC1.6□□□□□ -2.15
KRT9P35527 AC068647.2-201ENST00000637380 353 ntBASIC1.6□□□□□ -2.15
KRT9P35527 RNU6-704P-201ENST00000364162 103 ntBASIC1.59□□□□□ -2.15
KRT9P35527 RNU6-969P-201ENST00000383900 105 ntBASIC1.59□□□□□ -2.15
KRT9P35527 SNORD116-18-201ENST00000383961 92 ntBASIC1.59□□□□□ -2.15
KRT9P35527 Y_RNA.580-201ENST00000391004 95 ntBASIC1.59□□□□□ -2.15
KRT9P35527 RNU6-381P-201ENST00000391259 108 ntBASIC1.59□□□□□ -2.15
KRT9P35527 SEPT7P4-201ENST00000437076 306 ntBASIC1.59□□□□□ -2.15
KRT9P35527 RPS4XP11-201ENST00000446897 772 ntBASIC1.59□□□□□ -2.15
KRT9P35527 AL049830.1-201ENST00000468034 425 ntBASIC1.59□□□□□ -2.15
KRT9P35527 AC092991.1-201ENST00000477176 376 ntBASIC1.59□□□□□ -2.15
KRT9P35527 AC117454.1-201ENST00000491120 168 ntBASIC1.59□□□□□ -2.15
KRT9P35527 AC005840.1-201ENST00000498412 377 ntBASIC1.59□□□□□ -2.15
KRT9P35527 RNA5SP61-201ENST00000516453 100 ntBASIC1.59□□□□□ -2.15
KRT9P35527 MIR4724-201ENST00000579485 89 ntBASIC1.59□□□□□ -2.15
KRT9P35527 MIR5688-201ENST00000580619 83 ntBASIC1.59□□□□□ -2.15
KRT9P35527 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRT9P35527 MIR367-201ENST00000362299 68 ntBASIC1.58□□□□□ -2.16
KRT9P35527 RNU4-13P-201ENST00000364019 141 ntBASIC1.58□□□□□ -2.16
KRT9P35527 RNU6-60P-201ENST00000364792 103 ntBASIC1.58□□□□□ -2.16
KRT9P35527 RNU6-275P-201ENST00000364910 107 ntBASIC1.58□□□□□ -2.16
KRT9P35527 U8.7-201ENST00000364940 136 ntBASIC1.58□□□□□ -2.16
KRT9P35527 Y_RNA.343-201ENST00000365354 112 ntBASIC1.58□□□□□ -2.16
KRT9P35527 SNORD50.2-201ENST00000365465 70 ntBASIC1.58□□□□□ -2.16
KRT9P35527 MIR526A2-201ENST00000390198 65 ntBASIC1.58□□□□□ -2.16
KRT9P35527 RNU6-578P-201ENST00000390980 103 ntBASIC1.58□□□□□ -2.16
KRT9P35527 RNU5E-9P-201ENST00000411164 104 ntBASIC1.58□□□□□ -2.16
KRT9P35527 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.58□□□□□ -2.16
KRT9P35527 CYP3A52P-201ENST00000563326 91 ntBASIC1.58□□□□□ -2.16
KRT9P35527 MIR4303-201ENST00000581299 66 ntBASIC1.58□□□□□ -2.16
KRT9P35527 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.58□□□□□ -2.16
KRT9P35527 AC005972.2-201ENST00000604690 348 ntBASIC1.58□□□□□ -2.16
KRT9P35527 RNU6-199P-201ENST00000362954 107 ntBASIC1.57□□□□□ -2.16
KRT9P35527 Y_RNA.172-201ENST00000363765 102 ntBASIC1.57□□□□□ -2.16
KRT9P35527 RNU4-84P-201ENST00000364200 139 ntBASIC1.57□□□□□ -2.16
KRT9P35527 snoU2_19.4-201ENST00000364329 80 ntBASIC1.57□□□□□ -2.16
KRT9P35527 RNU4-41P-201ENST00000364426 143 ntBASIC1.57□□□□□ -2.16
KRT9P35527 RNU6-1130P-201ENST00000365434 107 ntBASIC1.57□□□□□ -2.16
KRT9P35527 Y_RNA.572-201ENST00000384757 98 ntBASIC1.57□□□□□ -2.16
KRT9P35527 MIR616-201ENST00000385293 97 ntBASIC1.57□□□□□ -2.16
KRT9P35527 SNORA67.5-201ENST00000391036 107 ntBASIC1.57□□□□□ -2.16
KRT9P35527 SNORA36B-201ENST00000410438 131 ntBASIC1.57□□□□□ -2.16
KRT9P35527 AL354695.1-201ENST00000427935 228 ntBASIC1.57□□□□□ -2.16
KRT9P35527 AC245047.8-201ENST00000456455 284 ntBASIC1.57□□□□□ -2.16
KRT9P35527 RPL30P7-201ENST00000479312 323 ntBASIC1.57□□□□□ -2.16
KRT9P35527 RNU7-115P-201ENST00000516433 55 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms