Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.04□□□□□ -2.08
PTPN7P35236 AC131055.1-201ENST00000584626 316 ntBASIC2.04□□□□□ -2.08
PTPN7P35236 MIR6840-201ENST00000611937 71 ntBASIC2.04□□□□□ -2.08
PTPN7P35236 Y_RNA.783-201ENST00000613546 102 ntBASIC2.04□□□□□ -2.08
PTPN7P35236 MIR449A-201ENST00000362113 91 ntBASIC2.03□□□□□ -2.08
PTPN7P35236 Y_RNA.547-201ENST00000384654 119 ntBASIC2.03□□□□□ -2.08
PTPN7P35236 RNU6-360P-201ENST00000390944 104 ntBASIC2.03□□□□□ -2.08
PTPN7P35236 Y_RNA.584-201ENST00000391090 114 ntBASIC2.03□□□□□ -2.08
PTPN7P35236 SNORD77.3-201ENST00000391113 65 ntBASIC2.03□□□□□ -2.08
PTPN7P35236 AF228730.3-201ENST00000436691 102 ntBASIC2.03□□□□□ -2.08
PTPN7P35236 RNU7-25P-201ENST00000516544 62 ntBASIC2.03□□□□□ -2.08
PTPN7P35236 AL513423.1-201ENST00000621695 132 ntBASIC2.03□□□□□ -2.08
PTPN7P35236 RNU6-959P-201ENST00000384671 107 ntBASIC2.02□□□□□ -2.09
PTPN7P35236 MIR891A-201ENST00000401237 79 ntBASIC2.02□□□□□ -2.09
PTPN7P35236 RN7SKP223-201ENST00000410582 62 ntBASIC2.02□□□□□ -2.09
PTPN7P35236 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.02□□□□□ -2.09
PTPN7P35236 RNU7-12P-201ENST00000516030 62 ntBASIC2.02□□□□□ -2.09
PTPN7P35236 SNORA18.4-201ENST00000516440 124 ntBASIC2.02□□□□□ -2.09
PTPN7P35236 RNU2-60P-201ENST00000517290 128 ntBASIC2.02□□□□□ -2.09
PTPN7P35236 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.02□□□□□ -2.09
PTPN7P35236 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
PTPN7P35236 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.01□□□□□ -2.09
PTPN7P35236 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
PTPN7P35236 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
PTPN7P35236 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
PTPN7P35236 RNA5SP212-201ENST00000391223 107 ntBASIC2.01□□□□□ -2.09
PTPN7P35236 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.01□□□□□ -2.09
PTPN7P35236 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.01□□□□□ -2.09
PTPN7P35236 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.01□□□□□ -2.09
PTPN7P35236 SNRPGP19-201ENST00000603826 189 ntBASIC2.01□□□□□ -2.09
PTPN7P35236 AL590808.1-201ENST00000618696 141 ntBASIC2.01□□□□□ -2.09
PTPN7P35236 MIR376A2-201ENST00000636782 80 ntBASIC2.01□□□□□ -2.09
PTPN7P35236 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2□□□□□ -2.09
PTPN7P35236 Y_RNA.52-201ENST00000362760 96 ntBASIC2□□□□□ -2.09
PTPN7P35236 Y_RNA.120-201ENST00000363304 110 ntBASIC2□□□□□ -2.09
PTPN7P35236 RNU6-915P-201ENST00000364943 103 ntBASIC2□□□□□ -2.09
PTPN7P35236 MIR17-201ENST00000385012 84 ntBASIC2□□□□□ -2.09
PTPN7P35236 MIR660-201ENST00000385235 97 ntBASIC2□□□□□ -2.09
PTPN7P35236 SNORA3.2-201ENST00000408221 125 ntBASIC2□□□□□ -2.09
PTPN7P35236 RNA5SP425-201ENST00000410336 112 ntBASIC2□□□□□ -2.09
PTPN7P35236 AC015922.2-201ENST00000435593 184 ntBASIC2□□□□□ -2.09
PTPN7P35236 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2□□□□□ -2.09
PTPN7P35236 PGBD4P5-201ENST00000445958 426 ntBASIC2□□□□□ -2.09
PTPN7P35236 RNU6-830P-201ENST00000516353 107 ntBASIC2□□□□□ -2.09
PTPN7P35236 Y_RNA.686-201ENST00000516548 134 ntBASIC2□□□□□ -2.09
PTPN7P35236 AP001328.1-201ENST00000528550 176 ntBASIC2□□□□□ -2.09
PTPN7P35236 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2□□□□□ -2.09
PTPN7P35236 AC134878.1-201ENST00000619901 243 ntBASIC2□□□□□ -2.09
PTPN7P35236 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2□□□□□ -2.09
PTPN7P35236 MIR424-201ENST00000362227 98 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 U8.1-201ENST00000362843 134 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 SNORD115-28-201ENST00000363931 81 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 RNU4-52P-201ENST00000384209 138 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 RNU6-938P-201ENST00000411285 103 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 Z98742.3-201ENST00000418637 326 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 AC093850.1-201ENST00000454121 251 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 RNA5SP57-201ENST00000459463 123 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 AC008413.1-201ENST00000511864 177 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 AC022254.1-201ENST00000567857 235 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
PTPN7P35236 AL773524.1-201ENST00000614065 229 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 TUG1_4.1-201ENST00000619464 181 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.99□□□□□ -2.09
PTPN7P35236 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.99□□□□□ -2.09
PTPN7P35236 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PTPN7P35236 AC008555.8-201ENST00000623602 2168 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 Y_RNA.37-201ENST00000362606 108 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 Y_RNA.410-201ENST00000383992 113 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 RNU6-203P-201ENST00000384038 104 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 SNORD38C-201ENST00000384381 69 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 MIR194-1-201ENST00000384892 85 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 MIR548I2-201ENST00000408348 149 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 HMGN2P38-201ENST00000423806 265 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 RNU4-57P-201ENST00000515980 135 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 RNU6-971P-201ENST00000516920 106 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 AC015726.2-201ENST00000620112 122 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 SCARNA15.3-201ENST00000626315 122 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 SCARNA4.1-201ENST00000628597 123 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 ZNF658B-202ENST00000615961 3375 ntBASIC1.98□□□□□ -2.09
PTPN7P35236 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PTPN7P35236 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.97□□□□□ -2.09
PTPN7P35236 AL161935.2-201ENST00000414627 60 ntBASIC1.97□□□□□ -2.09
PTPN7P35236 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.97□□□□□ -2.09
PTPN7P35236 SCARNA15-202ENST00000516881 127 ntBASIC1.97□□□□□ -2.09
PTPN7P35236 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.97□□□□□ -2.09
PTPN7P35236 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
PTPN7P35236 MIR5197-201ENST00000583721 112 ntBASIC1.97□□□□□ -2.09
PTPN7P35236 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
PTPN7P35236 U7.2-201ENST00000607576 63 ntBASIC1.97□□□□□ -2.09
PTPN7P35236 AC064859.1-201ENST00000624741 174 ntBASIC1.97□□□□□ -2.09
PTPN7P35236 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.97□□□□□ -2.09
PTPN7P35236 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
PTPN7P35236 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
PTPN7P35236 RNU6-508P-201ENST00000363231 103 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 Y_RNA.218-201ENST00000364218 104 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 RNU6-1117P-201ENST00000384525 104 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 AL603914.1-201ENST00000401964 204 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms