Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC112693.2-201ENST00000556538 232 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 AP001485.1-201ENST00000604799 199 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 AC006441.5-201ENST00000612680 209 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 AL513423.1-201ENST00000621695 132 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.02□□□□□ -2.09
SLC6A4P31645 Y_RNA.140-201ENST00000363474 103 ntBASIC2.01□□□□□ -2.09
SLC6A4P31645 SNORA4.2-201ENST00000365313 147 ntBASIC2.01□□□□□ -2.09
SLC6A4P31645 RNU6-163P-201ENST00000384396 106 ntBASIC2.01□□□□□ -2.09
SLC6A4P31645 Y_RNA.542-201ENST00000384641 111 ntBASIC2.01□□□□□ -2.09
SLC6A4P31645 MIR17-201ENST00000385012 84 ntBASIC2.01□□□□□ -2.09
SLC6A4P31645 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.01□□□□□ -2.09
SLC6A4P31645 AC025033.1-201ENST00000463883 194 ntBASIC2.01□□□□□ -2.09
SLC6A4P31645 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.01□□□□□ -2.09
SLC6A4P31645 RNU6-346P-201ENST00000516288 111 ntBASIC2.01□□□□□ -2.09
SLC6A4P31645 AC090142.3-201ENST00000519012 385 ntBASIC2.01□□□□□ -2.09
SLC6A4P31645 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.01□□□□□ -2.09
SLC6A4P31645 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.01□□□□□ -2.09
SLC6A4P31645 ZNF702P-202ENST00000434269 1966 ntBASIC2□□□□□ -2.09
SLC6A4P31645 MIRLET7C-201ENST00000362160 84 ntBASIC2□□□□□ -2.09
SLC6A4P31645 RNU6-888P-201ENST00000363010 101 ntBASIC2□□□□□ -2.09
SLC6A4P31645 RNU6-833P-201ENST00000363486 107 ntBASIC2□□□□□ -2.09
SLC6A4P31645 Y_RNA.164-201ENST00000363709 102 ntBASIC2□□□□□ -2.09
SLC6A4P31645 RNU6-704P-201ENST00000364162 103 ntBASIC2□□□□□ -2.09
SLC6A4P31645 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
SLC6A4P31645 RNU6-424P-201ENST00000384367 105 ntBASIC2□□□□□ -2.09
SLC6A4P31645 MIR891A-201ENST00000401237 79 ntBASIC2□□□□□ -2.09
SLC6A4P31645 AC019129.1-201ENST00000403786 261 ntBASIC2□□□□□ -2.09
SLC6A4P31645 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2□□□□□ -2.09
SLC6A4P31645 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
SLC6A4P31645 AL365205.2-201ENST00000594586 68 ntBASIC2□□□□□ -2.09
SLC6A4P31645 MIR3658-201ENST00000636291 56 ntBASIC2□□□□□ -2.09
SLC6A4P31645 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SLC6A4P31645 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2□□□□□ -2.09
SLC6A4P31645 RNA5SP276-201ENST00000362580 94 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 SNORD38C-201ENST00000384381 69 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.99□□□□□ -2.09
SLC6A4P31645 AC003989.2-201ENST00000440224 169 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 PGBD4P5-201ENST00000445958 426 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 RNA5SP57-201ENST00000459463 123 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 RNU6-406P-201ENST00000516470 107 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 SNORA31.17-201ENST00000516953 127 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 MIR4498-201ENST00000577599 66 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
SLC6A4P31645 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SLC6A4P31645 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SLC6A4P31645 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.98□□□□□ -2.09
SLC6A4P31645 RNU6-818P-201ENST00000364837 108 ntBASIC1.98□□□□□ -2.09
SLC6A4P31645 RNU6-1292P-201ENST00000383856 107 ntBASIC1.98□□□□□ -2.09
SLC6A4P31645 Y_RNA.568-201ENST00000384742 113 ntBASIC1.98□□□□□ -2.09
SLC6A4P31645 MIR569-201ENST00000385228 96 ntBASIC1.98□□□□□ -2.09
SLC6A4P31645 AC079804.2-201ENST00000490376 200 ntBASIC1.98□□□□□ -2.09
SLC6A4P31645 AC114811.1-201ENST00000507207 168 ntBASIC1.98□□□□□ -2.09
SLC6A4P31645 RNU6-1053P-201ENST00000515930 101 ntBASIC1.98□□□□□ -2.09
SLC6A4P31645 RNA5SP168-201ENST00000516642 112 ntBASIC1.98□□□□□ -2.09
SLC6A4P31645 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.98□□□□□ -2.09
SLC6A4P31645 AC021506.2-201ENST00000612354 169 ntBASIC1.98□□□□□ -2.09
SLC6A4P31645 MIR6845-201ENST00000613182 61 ntBASIC1.98□□□□□ -2.09
SLC6A4P31645 WWP1P1-201ENST00000466609 2769 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 RNU6-268P-201ENST00000364174 107 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 SNORD61-201ENST00000384252 73 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 Y_RNA.497-201ENST00000384447 98 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 MIR583-201ENST00000384846 75 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 MIR624-201ENST00000385217 97 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 U8.16-201ENST00000391279 133 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 RNA5SP338-201ENST00000410495 85 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 RNA5SP127-201ENST00000411051 133 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.97□□□□□ -2.09
SLC6A4P31645 CALM2P4-201ENST00000430810 426 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 SNRPGP14-201ENST00000435400 219 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 RNU6-693P-201ENST00000516134 107 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 Y_RNA.666-201ENST00000516187 112 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 AC007751.1-201ENST00000529260 376 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 MIR3910-1-201ENST00000580936 111 ntBASIC1.97□□□□□ -2.09
SLC6A4P31645 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SLC6A4P31645 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SLC6A4P31645 MIR424-201ENST00000362227 98 ntBASIC1.96□□□□□ -2.1
SLC6A4P31645 Y_RNA.226-201ENST00000364337 114 ntBASIC1.96□□□□□ -2.1
SLC6A4P31645 MIR660-201ENST00000385235 97 ntBASIC1.96□□□□□ -2.1
SLC6A4P31645 MIR548O-201ENST00000408583 114 ntBASIC1.96□□□□□ -2.1
SLC6A4P31645 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.96□□□□□ -2.1
SLC6A4P31645 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.96□□□□□ -2.1
SLC6A4P31645 RNU7-12P-201ENST00000516030 62 ntBASIC1.96□□□□□ -2.1
SLC6A4P31645 RNA5SP182-201ENST00000516064 82 ntBASIC1.96□□□□□ -2.1
SLC6A4P31645 SNORA25.12-201ENST00000516202 82 ntBASIC1.96□□□□□ -2.1
SLC6A4P31645 SNORA18.4-201ENST00000516440 124 ntBASIC1.96□□□□□ -2.1
SLC6A4P31645 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.96□□□□□ -2.1
SLC6A4P31645 AC132825.6-201ENST00000638861 357 ntBASIC1.96□□□□□ -2.1
SLC6A4P31645 RNU6-1123P-201ENST00000362347 106 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 RNU1-17P-201ENST00000363022 152 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 Y_RNA.410-201ENST00000383992 113 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 MIR452-201ENST00000385020 85 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SLC6A4P31645 SNORA40.18-201ENST00000391200 128 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 RNU6-588P-201ENST00000410281 105 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 AC244636.1-201ENST00000421152 228 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms