Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 SNORA54-201ENST00000384281 123 ntBASIC2.93□□□□□ -1.94
COL8A1P27658 RNU6-1307P-201ENST00000391012 103 ntBASIC2.93□□□□□ -1.94
COL8A1P27658 RNU6-519P-201ENST00000410590 108 ntBASIC2.93□□□□□ -1.94
COL8A1P27658 SRIP3-201ENST00000413200 219 ntBASIC2.93□□□□□ -1.94
COL8A1P27658 SCARNA18B-201ENST00000458806 135 ntBASIC2.93□□□□□ -1.94
COL8A1P27658 RN7SL297P-201ENST00000483161 293 ntBASIC2.93□□□□□ -1.94
COL8A1P27658 RNU6-237P-201ENST00000515985 71 ntBASIC2.93□□□□□ -1.94
COL8A1P27658 RNU7-181P-201ENST00000517234 74 ntBASIC2.93□□□□□ -1.94
COL8A1P27658 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.93□□□□□ -1.94
COL8A1P27658 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL8A1P27658 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL8A1P27658 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL8A1P27658 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL8A1P27658 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.92□□□□□ -1.94
COL8A1P27658 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL8A1P27658 MIRLET7A1-201ENST00000362295 80 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 Y_RNA.173-201ENST00000363776 113 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 SNORA1.2-201ENST00000365189 134 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 RNU6-480P-201ENST00000384332 107 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 CST2P1-201ENST00000425770 87 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.92□□□□□ -1.94
COL8A1P27658 RN7SL636P-201ENST00000497504 294 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 AC008885.1-201ENST00000514930 301 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 RNU6-826P-201ENST00000516827 104 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 RNU6-1015P-201ENST00000517121 99 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 MIR3162-201ENST00000581818 82 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 MIR6717-201ENST00000622747 73 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 AC027279.3-201ENST00000625055 122 ntBASIC2.92□□□□□ -1.94
COL8A1P27658 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL8A1P27658 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.92□□□□□ -1.94
COL8A1P27658 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.91□□□□□ -1.94
COL8A1P27658 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL8A1P27658 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
COL8A1P27658 Y_RNA.168-201ENST00000363740 102 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 Y_RNA.205-201ENST00000364128 113 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 RNU6-686P-201ENST00000364839 107 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 Y_RNA.386-201ENST00000383913 105 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 RNU6-163P-201ENST00000384396 106 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 AC015922.2-201ENST00000435593 184 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 SPINT5P-201ENST00000448174 155 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 RN7SL863P-201ENST00000462370 296 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 SCARNA17.1-201ENST00000516211 143 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 SCARNA17.2-201ENST00000516334 143 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 MIR4435-1-201ENST00000582552 80 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 SCARNA17.4-201ENST00000614296 143 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.91□□□□□ -1.94
COL8A1P27658 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL8A1P27658 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.91□□□□□ -1.94
COL8A1P27658 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL8A1P27658 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL8A1P27658 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
COL8A1P27658 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
COL8A1P27658 RNU6-865P-201ENST00000364772 107 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 SNORD38.2-201ENST00000384470 69 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 MIR181B2-201ENST00000385004 89 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 MIR95-201ENST00000385072 81 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 MIR591-201ENST00000385290 95 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 RNU2-59P-201ENST00000410482 191 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 AC245047.3-201ENST00000429428 127 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 MICF-203ENST00000432679 129 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 AC087499.7-201ENST00000441958 109 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.9□□□□□ -1.95
COL8A1P27658 ATP5J2P3-201ENST00000451550 258 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 SCARNA11.3-201ENST00000517276 130 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 AC020891.4-201ENST00000605745 93 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 MIR5739-201ENST00000619803 80 ntBASIC2.9□□□□□ -1.95
COL8A1P27658 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.9□□□□□ -1.95
COL8A1P27658 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
COL8A1P27658 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL8A1P27658 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL8A1P27658 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COL8A1P27658 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
COL8A1P27658 RNU2-48P-201ENST00000410694 191 ntBASIC2.89□□□□□ -1.95
COL8A1P27658 RNA5SP508-201ENST00000411327 119 ntBASIC2.89□□□□□ -1.95
COL8A1P27658 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.89□□□□□ -1.95
COL8A1P27658 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.89□□□□□ -1.95
COL8A1P27658 RPS29P31-201ENST00000446147 164 ntBASIC2.89□□□□□ -1.95
COL8A1P27658 RNU6-958P-201ENST00000516995 106 ntBASIC2.89□□□□□ -1.95
COL8A1P27658 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.89□□□□□ -1.95
COL8A1P27658 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.89□□□□□ -1.95
COL8A1P27658 AC006111.3-201ENST00000622137 383 ntBASIC2.89□□□□□ -1.95
COL8A1P27658 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL8A1P27658 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.89□□□□□ -1.95
COL8A1P27658 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL8A1P27658 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.88□□□□□ -1.95
COL8A1P27658 RNU1-23P-201ENST00000363361 144 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 MIR184-201ENST00000384962 84 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 MTND4LP19-201ENST00000403051 166 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 RNU7-67P-201ENST00000459003 62 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 snoU13.11-201ENST00000459219 104 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 RNU7-35P-201ENST00000517174 62 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 RNU6-1116P-201ENST00000517269 99 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 MIR4425-201ENST00000580572 84 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 MIR4769-201ENST00000584126 77 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 AC012676.2-201ENST00000619258 186 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 MIR7843-201ENST00000622274 79 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 SNORA50A-202ENST00000629536 136 ntBASIC2.88□□□□□ -1.95
COL8A1P27658 AC009487.2-201ENST00000420969 6821 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL8A1P27658 MIRLET7C-201ENST00000362160 84 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms