Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RNU6-349P-201ENST00000362402 107 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 SNORA1B-201ENST00000362535 133 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 RNU6-755P-201ENST00000364400 103 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 snoU2-30.1-201ENST00000365012 70 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 MIRLET7F2-201ENST00000385277 83 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 MIR548A3-201ENST00000385297 97 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.14□□□□□ -2.07
POLR2AP24928 Y_RNA.651-201ENST00000459380 103 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.14□□□□□ -2.07
POLR2AP24928 AC004486.1-201ENST00000546846 233 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 AL160236.1-201ENST00000556317 195 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 MIR3914-2-201ENST00000637339 95 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.14□□□□□ -2.07
POLR2AP24928 SNORD56.5-201ENST00000364281 72 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 RNU6-1064P-201ENST00000410626 104 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.14□□□□□ -2.07
POLR2AP24928 SNORA48.11-201ENST00000517015 89 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 AC090142.3-201ENST00000519012 385 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 AP002004.2-201ENST00000531656 154 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 MIR3129-201ENST00000581095 76 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 BX248123.2-201ENST00000606318 124 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 U6.108-201ENST00000637764 58 ntBASIC2.14□□□□□ -2.07
POLR2AP24928 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
POLR2AP24928 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
POLR2AP24928 Y_RNA.120-201ENST00000363304 110 ntBASIC2.13□□□□□ -2.07
POLR2AP24928 RNU1-96P-201ENST00000364163 162 ntBASIC2.13□□□□□ -2.07
POLR2AP24928 Y_RNA.261-201ENST00000364631 102 ntBASIC2.13□□□□□ -2.07
POLR2AP24928 SNORA8-201ENST00000384574 139 ntBASIC2.13□□□□□ -2.07
POLR2AP24928 RNA5SP492-201ENST00000411330 114 ntBASIC2.13□□□□□ -2.07
POLR2AP24928 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.13□□□□□ -2.07
POLR2AP24928 AC024995.1-201ENST00000523014 93 ntBASIC2.13□□□□□ -2.07
POLR2AP24928 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
POLR2AP24928 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.13□□□□□ -2.07
POLR2AP24928 AC134878.1-201ENST00000619901 243 ntBASIC2.13□□□□□ -2.07
POLR2AP24928 WWP1P1-201ENST00000466609 2769 ntBASIC2.13□□□□□ -2.07
POLR2AP24928 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.13□□□□□ -2.07
POLR2AP24928 RNU6-1164P-201ENST00000364428 107 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 AC245047.3-201ENST00000429428 127 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 AC025166.1-201ENST00000612411 163 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 AL591926.4-201ENST00000616895 298 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
POLR2AP24928 RNU6-1019P-201ENST00000364424 107 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 RNU6-1107P-201ENST00000364817 104 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 MIR29C-201ENST00000385231 88 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 MIR1262-201ENST00000408276 93 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.12□□□□□ -2.07
POLR2AP24928 SNRPGP14-201ENST00000435400 219 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 AC069257.2-201ENST00000441819 155 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.12□□□□□ -2.07
POLR2AP24928 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.12□□□□□ -2.07
POLR2AP24928 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
POLR2AP24928 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.11□□□□□ -2.07
POLR2AP24928 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
POLR2AP24928 MIR340-201ENST00000362125 95 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 VTRNA1-1-201ENST00000363120 99 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 SNORA63.5-201ENST00000363548 123 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 Y_RNA.299-201ENST00000364973 94 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 Y_RNA.410-201ENST00000383992 113 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 Y_RNA.486-201ENST00000384398 107 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 SNORA12.1-201ENST00000390873 148 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 CST2P1-201ENST00000425770 87 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 FTH1P12-201ENST00000432137 551 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 AF228730.3-201ENST00000436691 102 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 AL606517.2-201ENST00000442855 241 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 NDUFA4P2-201ENST00000489989 244 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 CYCTP-201ENST00000504253 315 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 RNU1-40P-201ENST00000516816 164 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 RNU1-97P-201ENST00000516872 164 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 RNU1-104P-201ENST00000517280 175 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.11□□□□□ -2.07
POLR2AP24928 MIR502-201ENST00000606349 86 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.11□□□□□ -2.07
POLR2AP24928 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.11□□□□□ -2.07
POLR2AP24928 ZNF271P-202ENST00000465539 1970 ntBASIC2.11□□□□□ -2.07
POLR2AP24928 RNU1-23P-201ENST00000363361 144 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 RNU6-1209P-201ENST00000363655 107 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 RNA5SP493-201ENST00000364115 91 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 RNU6-147P-201ENST00000383983 107 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 RNA5SP482-201ENST00000391269 118 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 RNU2-7P-201ENST00000410794 178 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 AC009238.1-201ENST00000442165 424 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 AC009237.6-201ENST00000446969 424 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 AC026271.5-201ENST00000577873 130 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 MIR4679-2-201ENST00000578358 77 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 MIR3613-201ENST00000579844 87 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 AC008507.4-201ENST00000585464 127 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 MIR8081-201ENST00000611533 95 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 MIR338-201ENST00000636369 67 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.1□□□□□ -2.07
POLR2AP24928 RNU6-1255P-201ENST00000363434 112 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.1□□□□□ -2.07
POLR2AP24928 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.1□□□□□ -2.07
POLR2AP24928 AL049779.4-201ENST00000604500 156 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 U6.95-201ENST00000636931 70 ntBASIC2.1□□□□□ -2.07
POLR2AP24928 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.07
POLR2AP24928 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
POLR2AP24928 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
POLR2AP24928 SNORD115-28-201ENST00000363931 81 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms