Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SNORA80A-201ENST00000363922 136 ntBASIC2.22□□□□□ -2.05
ATF4P18848 SNORD115-6-201ENST00000363942 82 ntBASIC2.22□□□□□ -2.05
ATF4P18848 SNORD115-42-201ENST00000364273 82 ntBASIC2.22□□□□□ -2.05
ATF4P18848 SNORD115-15-201ENST00000364809 81 ntBASIC2.22□□□□□ -2.05
ATF4P18848 SNORD115-1-201ENST00000364961 82 ntBASIC2.22□□□□□ -2.05
ATF4P18848 SNORD115-26-201ENST00000365067 82 ntBASIC2.22□□□□□ -2.05
ATF4P18848 SNORD115-10-201ENST00000365073 81 ntBASIC2.22□□□□□ -2.05
ATF4P18848 SNORD115-43-201ENST00000365503 82 ntBASIC2.22□□□□□ -2.05
ATF4P18848 SNORD115-36-201ENST00000365629 82 ntBASIC2.22□□□□□ -2.05
ATF4P18848 MIR653-201ENST00000385279 96 ntBASIC2.22□□□□□ -2.05
ATF4P18848 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.22□□□□□ -2.05
ATF4P18848 RNU7-80P-201ENST00000459562 61 ntBASIC2.22□□□□□ -2.05
ATF4P18848 AC008885.1-201ENST00000514930 301 ntBASIC2.22□□□□□ -2.05
ATF4P18848 RNU6-917P-201ENST00000516294 104 ntBASIC2.22□□□□□ -2.05
ATF4P18848 SNORA74.3-201ENST00000517108 154 ntBASIC2.22□□□□□ -2.05
ATF4P18848 ELOCP29-201ENST00000588193 334 ntBASIC2.22□□□□□ -2.05
ATF4P18848 AL513534.2-201ENST00000603836 250 ntBASIC2.22□□□□□ -2.05
ATF4P18848 SNORD115-40-201ENST00000606510 82 ntBASIC2.22□□□□□ -2.05
ATF4P18848 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ATF4P18848 AL136360.1-201ENST00000503377 1900 ntBASIC2.21□□□□□ -2.06
ATF4P18848 RNU6-915P-201ENST00000364943 103 ntBASIC2.21□□□□□ -2.06
ATF4P18848 SNORA27-201ENST00000384323 126 ntBASIC2.21□□□□□ -2.06
ATF4P18848 SNORA20-201ENST00000384662 132 ntBASIC2.21□□□□□ -2.06
ATF4P18848 RNA5SP489-201ENST00000410986 109 ntBASIC2.21□□□□□ -2.06
ATF4P18848 RNU6-938P-201ENST00000411285 103 ntBASIC2.21□□□□□ -2.06
ATF4P18848 RNA5SP272-201ENST00000516095 111 ntBASIC2.21□□□□□ -2.06
ATF4P18848 MIR3910-1-201ENST00000580936 111 ntBASIC2.21□□□□□ -2.06
ATF4P18848 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.21□□□□□ -2.06
ATF4P18848 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.21□□□□□ -2.06
ATF4P18848 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ATF4P18848 AP000648.3-201ENST00000623539 4507 ntBASIC2.21□□□□□ -2.06
ATF4P18848 AL365361.1-201ENST00000566942 3481 ntBASIC2.21□□□□□ -2.06
ATF4P18848 Y_RNA.440-201ENST00000384120 114 ntBASIC2.2□□□□□ -2.06
ATF4P18848 SNORA70.7-201ENST00000384159 133 ntBASIC2.2□□□□□ -2.06
ATF4P18848 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
ATF4P18848 Y_RNA.454-201ENST00000384224 113 ntBASIC2.2□□□□□ -2.06
ATF4P18848 SNORA67.3-201ENST00000384366 140 ntBASIC2.2□□□□□ -2.06
ATF4P18848 RN7SKP132-201ENST00000516001 208 ntBASIC2.2□□□□□ -2.06
ATF4P18848 RNU7-43P-201ENST00000516554 64 ntBASIC2.2□□□□□ -2.06
ATF4P18848 RNU6-1149P-201ENST00000516810 97 ntBASIC2.2□□□□□ -2.06
ATF4P18848 Y_RNA.757-201ENST00000578934 114 ntBASIC2.2□□□□□ -2.06
ATF4P18848 SNORD53-201ENST00000579969 78 ntBASIC2.2□□□□□ -2.06
ATF4P18848 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.2□□□□□ -2.06
ATF4P18848 MTND5P32-201ENST00000560711 1802 ntBASIC2.19□□□□□ -2.06
ATF4P18848 U8.1-201ENST00000362843 134 ntBASIC2.19□□□□□ -2.06
ATF4P18848 Y_RNA.351-201ENST00000365436 96 ntBASIC2.19□□□□□ -2.06
ATF4P18848 RNU6-301P-201ENST00000384277 107 ntBASIC2.19□□□□□ -2.06
ATF4P18848 SNORA54-201ENST00000384281 123 ntBASIC2.19□□□□□ -2.06
ATF4P18848 RNU6-257P-201ENST00000410238 98 ntBASIC2.19□□□□□ -2.06
ATF4P18848 RPS12P2-201ENST00000439728 269 ntBASIC2.19□□□□□ -2.06
ATF4P18848 Y_RNA.692-201ENST00000516627 105 ntBASIC2.19□□□□□ -2.06
ATF4P18848 MIR3162-201ENST00000581818 82 ntBASIC2.19□□□□□ -2.06
ATF4P18848 AL357312.1-201ENST00000603879 298 ntBASIC2.19□□□□□ -2.06
ATF4P18848 U7.2-201ENST00000607576 63 ntBASIC2.19□□□□□ -2.06
ATF4P18848 AC132825.6-201ENST00000638861 357 ntBASIC2.19□□□□□ -2.06
ATF4P18848 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
ATF4P18848 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
ATF4P18848 MIR539-201ENST00000365690 78 ntBASIC2.18□□□□□ -2.06
ATF4P18848 RPS26P48-201ENST00000491713 339 ntBASIC2.18□□□□□ -2.06
ATF4P18848 AC079140.2-201ENST00000506193 142 ntBASIC2.18□□□□□ -2.06
ATF4P18848 Y_RNA.690-201ENST00000516603 95 ntBASIC2.18□□□□□ -2.06
ATF4P18848 AC090821.2-201ENST00000523552 176 ntBASIC2.18□□□□□ -2.06
ATF4P18848 MIR548AR-201ENST00000582191 57 ntBASIC2.18□□□□□ -2.06
ATF4P18848 AC011603.4-201ENST00000611325 277 ntBASIC2.18□□□□□ -2.06
ATF4P18848 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.18□□□□□ -2.06
ATF4P18848 AC006386.2-201ENST00000624491 75 ntBASIC2.18□□□□□ -2.06
ATF4P18848 AC012005.1-201ENST00000624575 75 ntBASIC2.18□□□□□ -2.06
ATF4P18848 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
ATF4P18848 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ATF4P18848 MIR26A1-201ENST00000362205 77 ntBASIC2.17□□□□□ -2.06
ATF4P18848 RNY1P11-201ENST00000363759 113 ntBASIC2.17□□□□□ -2.06
ATF4P18848 MIR520C-201ENST00000385005 87 ntBASIC2.17□□□□□ -2.06
ATF4P18848 Y_RNA.586-201ENST00000391146 98 ntBASIC2.17□□□□□ -2.06
ATF4P18848 AL603914.1-201ENST00000401964 204 ntBASIC2.17□□□□□ -2.06
ATF4P18848 AL023284.1-201ENST00000403956 276 ntBASIC2.17□□□□□ -2.06
ATF4P18848 SNX2P2-201ENST00000424553 323 ntBASIC2.17□□□□□ -2.06
ATF4P18848 MTND4LP9-201ENST00000427694 174 ntBASIC2.17□□□□□ -2.06
ATF4P18848 AC005908.1-201ENST00000468701 347 ntBASIC2.17□□□□□ -2.06
ATF4P18848 RPS29P24-201ENST00000486345 171 ntBASIC2.17□□□□□ -2.06
ATF4P18848 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.17□□□□□ -2.06
ATF4P18848 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.17□□□□□ -2.06
ATF4P18848 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ATF4P18848 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.17□□□□□ -2.06
ATF4P18848 ZNF720P1-201ENST00000562403 1939 ntBASIC2.17□□□□□ -2.06
ATF4P18848 AL359851.1-201ENST00000569460 4997 ntBASIC2.16□□□□□ -2.06
ATF4P18848 RNU6-1065P-201ENST00000384513 106 ntBASIC2.16□□□□□ -2.06
ATF4P18848 RNU7-67P-201ENST00000459003 62 ntBASIC2.16□□□□□ -2.06
ATF4P18848 RNU7-96P-201ENST00000459535 64 ntBASIC2.16□□□□□ -2.06
ATF4P18848 UBL5P3-201ENST00000475112 231 ntBASIC2.16□□□□□ -2.06
ATF4P18848 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
ATF4P18848 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
ATF4P18848 AC008834.1-201ENST00000511612 175 ntBASIC2.16□□□□□ -2.06
ATF4P18848 RNU6-922P-201ENST00000516753 99 ntBASIC2.16□□□□□ -2.06
ATF4P18848 SCARNA15-202ENST00000516881 127 ntBASIC2.16□□□□□ -2.06
ATF4P18848 MIR6852-201ENST00000621699 66 ntBASIC2.16□□□□□ -2.06
ATF4P18848 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.16□□□□□ -2.06
ATF4P18848 MIR376A2-201ENST00000636782 80 ntBASIC2.16□□□□□ -2.06
ATF4P18848 MIR302B-201ENST00000362188 73 ntBASIC2.15□□□□□ -2.07
ATF4P18848 MIR342-201ENST00000362212 99 ntBASIC2.15□□□□□ -2.07
ATF4P18848 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms