Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PDCD5P2-201ENST00000507570 312 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 RN7SKP164-201ENST00000516138 266 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 SEPT14P17-201ENST00000617978 177 ntBASIC0.97□□□□□ -2.25
ERCC2P18074 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.97□□□□□ -2.25
ERCC2P18074 AC068700.1-201ENST00000565862 3754 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 Y_RNA.11-201ENST00000362375 109 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 RNU6-144P-201ENST00000383951 107 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 RNU6-1227P-201ENST00000383981 107 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 MIR499A-201ENST00000384903 122 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 AL603910.2-201ENST00000407268 136 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 RNU6-383P-201ENST00000410864 94 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 BTF3P11-201ENST00000426582 477 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 MTND5P22-201ENST00000458380 195 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 RNU6-1007P-201ENST00000516586 107 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 MIR6504-201ENST00000613520 61 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 Pinc.1-201ENST00000616452 154 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 AC008133.2-201ENST00000624540 351 ntBASIC0.96□□□□□ -2.26
ERCC2P18074 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
ERCC2P18074 Y_RNA.84-201ENST00000363011 104 ntBASIC0.95□□□□□ -2.26
ERCC2P18074 AL731563.1-201ENST00000442202 214 ntBASIC0.95□□□□□ -2.26
ERCC2P18074 RNU6-830P-201ENST00000516353 107 ntBASIC0.95□□□□□ -2.26
ERCC2P18074 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.95□□□□□ -2.26
ERCC2P18074 AC023827.1-201ENST00000569247 97 ntBASIC0.95□□□□□ -2.26
ERCC2P18074 MIR5692C2-201ENST00000577959 77 ntBASIC0.95□□□□□ -2.26
ERCC2P18074 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
ERCC2P18074 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ERCC2P18074 RNA5SP247-201ENST00000411181 105 ntBASIC0.94□□□□□ -2.26
ERCC2P18074 POLR2J4-204ENST00000418424 324 ntBASIC0.94□□□□□ -2.26
ERCC2P18074 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
ERCC2P18074 SNORA27.4-201ENST00000516650 95 ntBASIC0.94□□□□□ -2.26
ERCC2P18074 AC015726.2-201ENST00000620112 122 ntBASIC0.94□□□□□ -2.26
ERCC2P18074 MIR4251-201ENST00000635819 61 ntBASIC0.94□□□□□ -2.26
ERCC2P18074 Y_RNA.293-201ENST00000364908 93 ntBASIC0.93□□□□□ -2.26
ERCC2P18074 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
ERCC2P18074 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
ERCC2P18074 U8.17-201ENST00000391292 132 ntBASIC0.93□□□□□ -2.26
ERCC2P18074 AC113618.1-201ENST00000416747 285 ntBASIC0.93□□□□□ -2.26
ERCC2P18074 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.93□□□□□ -2.26
ERCC2P18074 SCARNA24.2-201ENST00000516968 130 ntBASIC0.93□□□□□ -2.26
ERCC2P18074 RNU6-570P-201ENST00000517051 105 ntBASIC0.93□□□□□ -2.26
ERCC2P18074 AC131055.1-201ENST00000584626 316 ntBASIC0.93□□□□□ -2.26
ERCC2P18074 AC006441.5-201ENST00000612680 209 ntBASIC0.93□□□□□ -2.26
ERCC2P18074 snoU18.1-201ENST00000629629 71 ntBASIC0.93□□□□□ -2.26
ERCC2P18074 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
ERCC2P18074 MIR96-201ENST00000362288 78 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 MIR367-201ENST00000362299 68 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 Y_RNA.14-201ENST00000362415 103 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 Y_RNA.217-201ENST00000364214 105 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 Y_RNA.226-201ENST00000364337 114 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 MIR570-201ENST00000384917 97 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 RPS3AP1-201ENST00000413190 320 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.92□□□□□ -2.26
ERCC2P18074 AC023449.1-201ENST00000454464 154 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 Y_RNA.641-201ENST00000459414 105 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 SERF1AP1-201ENST00000514575 187 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 RNU6-1338P-201ENST00000516328 91 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 RNU7-181P-201ENST00000517234 74 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 AL008718.3-201ENST00000610217 321 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 AC022140.2-201ENST00000623500 188 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 MIR6767-201ENST00000637302 66 ntBASIC0.92□□□□□ -2.26
ERCC2P18074 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.91□□□□□ -2.26
ERCC2P18074 Y_RNA.191-201ENST00000363972 113 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 Y_RNA.242-201ENST00000364473 110 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 MIR1287-201ENST00000408492 90 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 MIR1302-7-201ENST00000408841 72 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 RNU6-1203P-201ENST00000410703 110 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.91□□□□□ -2.26
ERCC2P18074 AL392103.1-201ENST00000447000 198 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.91□□□□□ -2.26
ERCC2P18074 RNU7-149P-201ENST00000516739 59 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 DEFB108E-201ENST00000524692 240 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 AC109810.1-201ENST00000534066 224 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.91□□□□□ -2.26
ERCC2P18074 MIR4724-201ENST00000579485 89 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.91□□□□□ -2.26
ERCC2P18074 AL049861.1-201ENST00000603130 150 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 AL021707.8-201ENST00000609428 183 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 uc_338.4-201ENST00000616635 176 ntBASIC0.91□□□□□ -2.26
ERCC2P18074 RNA5SP496-201ENST00000391240 109 ntBASIC0.9□□□□□ -2.27
ERCC2P18074 FABP5P4-201ENST00000437203 171 ntBASIC0.9□□□□□ -2.27
ERCC2P18074 RNA5SP255-201ENST00000516370 107 ntBASIC0.9□□□□□ -2.27
ERCC2P18074 RNU6-113P-201ENST00000516653 101 ntBASIC0.9□□□□□ -2.27
ERCC2P18074 RNU6-197P-201ENST00000516680 100 ntBASIC0.9□□□□□ -2.27
ERCC2P18074 RNU11-2P-201ENST00000516898 142 ntBASIC0.9□□□□□ -2.27
ERCC2P18074 AP003072.1-201ENST00000531740 145 ntBASIC0.9□□□□□ -2.27
ERCC2P18074 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
ERCC2P18074 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
ERCC2P18074 UBE2WP1-201ENST00000362030 340 ntBASIC0.89□□□□□ -2.27
ERCC2P18074 Y_RNA.512-201ENST00000384518 102 ntBASIC0.89□□□□□ -2.27
ERCC2P18074 RNU6-1109P-201ENST00000391187 107 ntBASIC0.89□□□□□ -2.27
ERCC2P18074 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
ERCC2P18074 RNU4-57P-201ENST00000515980 135 ntBASIC0.89□□□□□ -2.27
ERCC2P18074 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
ERCC2P18074 MIR4452-201ENST00000583004 71 ntBASIC0.89□□□□□ -2.27
ERCC2P18074 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
ERCC2P18074 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
ERCC2P18074 MIR373-201ENST00000362273 69 ntBASIC0.88□□□□□ -2.27
ERCC2P18074 RNU4-10P-201ENST00000364383 140 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 211.4 ms