Protein–RNA interactions for Protein: P16499

PDE6A, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6AP16499 Y_RNA.525-201ENST00000384570 113 ntBASIC2.39□□□□□ -2.03
PDE6AP16499 RNU6-950P-201ENST00000384651 107 ntBASIC2.39□□□□□ -2.03
PDE6AP16499 MIR524-201ENST00000385242 87 ntBASIC2.39□□□□□ -2.03
PDE6AP16499 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.39□□□□□ -2.03
PDE6AP16499 RNA5SP127-201ENST00000411051 133 ntBASIC2.39□□□□□ -2.03
PDE6AP16499 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.39□□□□□ -2.03
PDE6AP16499 AL021397.1-201ENST00000451806 248 ntBASIC2.39□□□□□ -2.03
PDE6AP16499 IGLV3-17-201ENST00000519099 244 ntBASIC2.39□□□□□ -2.03
PDE6AP16499 MIR6895-201ENST00000613497 78 ntBASIC2.39□□□□□ -2.03
PDE6AP16499 AC245884.12-201ENST00000615364 59 ntBASIC2.39□□□□□ -2.03
PDE6AP16499 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PDE6AP16499 RNU6-235P-201ENST00000362644 107 ntBASIC2.38□□□□□ -2.03
PDE6AP16499 SNORA3A-201ENST00000364113 130 ntBASIC2.38□□□□□ -2.03
PDE6AP16499 MIR802-201ENST00000390235 94 ntBASIC2.38□□□□□ -2.03
PDE6AP16499 RNU6-1064P-201ENST00000410626 104 ntBASIC2.38□□□□□ -2.03
PDE6AP16499 RNA5SP501-201ENST00000410990 112 ntBASIC2.38□□□□□ -2.03
PDE6AP16499 STAG3L5P-204ENST00000443759 179 ntBASIC2.38□□□□□ -2.03
PDE6AP16499 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.38□□□□□ -2.03
PDE6AP16499 U1.36-201ENST00000620684 176 ntBASIC2.38□□□□□ -2.03
PDE6AP16499 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.38□□□□□ -2.03
PDE6AP16499 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.37□□□□□ -2.03
PDE6AP16499 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PDE6AP16499 RNU6-1084P-201ENST00000362498 107 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 Y_RNA.52-201ENST00000362760 96 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 RNU6-888P-201ENST00000363010 101 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 Y_RNA.114-201ENST00000363265 113 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 snoU2-30.1-201ENST00000365012 70 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 RNU6-1144P-201ENST00000384247 104 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 MIR520A-201ENST00000384862 85 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 SNORA40.5-201ENST00000391061 128 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 RN7SKP200-201ENST00000410564 320 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 Y_RNA.617-201ENST00000410920 90 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 AC025033.1-201ENST00000463883 194 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 RNU6-772P-201ENST00000516042 105 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 SNORA31.10-201ENST00000516482 106 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 SNORA31.25-201ENST00000517242 134 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 SUB1P4-201ENST00000566062 339 ntBASIC2.37□□□□□ -2.03
PDE6AP16499 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.37□□□□□ -2.03
PDE6AP16499 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
PDE6AP16499 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PDE6AP16499 SNORD14E-201ENST00000364009 85 ntBASIC2.36□□□□□ -2.03
PDE6AP16499 SNORD18B-201ENST00000365659 72 ntBASIC2.36□□□□□ -2.03
PDE6AP16499 SNORD61-201ENST00000384252 73 ntBASIC2.36□□□□□ -2.03
PDE6AP16499 RNU6-429P-201ENST00000384582 108 ntBASIC2.36□□□□□ -2.03
PDE6AP16499 RNU6-476P-201ENST00000384726 107 ntBASIC2.36□□□□□ -2.03
PDE6AP16499 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.36□□□□□ -2.03
PDE6AP16499 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.36□□□□□ -2.03
PDE6AP16499 SNORA18.4-201ENST00000516440 124 ntBASIC2.36□□□□□ -2.03
PDE6AP16499 MIR4529-201ENST00000578110 78 ntBASIC2.36□□□□□ -2.03
PDE6AP16499 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
PDE6AP16499 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PDE6AP16499 RNU6-309P-201ENST00000364573 106 ntBASIC2.35□□□□□ -2.03
PDE6AP16499 RNU6-442P-201ENST00000383968 104 ntBASIC2.35□□□□□ -2.03
PDE6AP16499 SNORA1-201ENST00000384107 130 ntBASIC2.35□□□□□ -2.03
PDE6AP16499 AL034345.1-201ENST00000407768 123 ntBASIC2.35□□□□□ -2.03
PDE6AP16499 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.35□□□□□ -2.03
PDE6AP16499 SNRPGP13-201ENST00000442212 177 ntBASIC2.35□□□□□ -2.03
PDE6AP16499 Y_RNA.666-201ENST00000516187 112 ntBASIC2.35□□□□□ -2.03
PDE6AP16499 Y_RNA.690-201ENST00000516603 95 ntBASIC2.35□□□□□ -2.03
PDE6AP16499 SNORD45.4-201ENST00000516629 73 ntBASIC2.35□□□□□ -2.03
PDE6AP16499 RNU7-193P-201ENST00000516723 65 ntBASIC2.35□□□□□ -2.03
PDE6AP16499 AC121758.2-201ENST00000553271 193 ntBASIC2.35□□□□□ -2.03
PDE6AP16499 U6.95-201ENST00000636931 70 ntBASIC2.35□□□□□ -2.03
PDE6AP16499 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PDE6AP16499 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.34□□□□□ -2.03
PDE6AP16499 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PDE6AP16499 RNU6-647P-201ENST00000364243 107 ntBASIC2.34□□□□□ -2.03
PDE6AP16499 Y_RNA.336-201ENST00000365307 109 ntBASIC2.34□□□□□ -2.03
PDE6AP16499 MIR548A2-201ENST00000384956 97 ntBASIC2.34□□□□□ -2.03
PDE6AP16499 MIRLET7F2-201ENST00000385277 83 ntBASIC2.34□□□□□ -2.03
PDE6AP16499 U8.13-201ENST00000390842 128 ntBASIC2.34□□□□□ -2.03
PDE6AP16499 RNU2-7P-201ENST00000410794 178 ntBASIC2.34□□□□□ -2.03
PDE6AP16499 RNA5SP450-201ENST00000411206 102 ntBASIC2.34□□□□□ -2.03
PDE6AP16499 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.34□□□□□ -2.03
PDE6AP16499 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.34□□□□□ -2.03
PDE6AP16499 HSPE1P9-201ENST00000440046 311 ntBASIC2.34□□□□□ -2.03
PDE6AP16499 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
PDE6AP16499 RNA5SP236-201ENST00000516169 116 ntBASIC2.34□□□□□ -2.03
PDE6AP16499 MIR6715A-201ENST00000615929 79 ntBASIC2.34□□□□□ -2.03
PDE6AP16499 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PDE6AP16499 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PDE6AP16499 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PDE6AP16499 RNU6-112P-201ENST00000363599 104 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 RNU6-153P-201ENST00000364422 104 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 RNU6-296P-201ENST00000384608 107 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 RNY4P18-201ENST00000391107 89 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 AF228730.3-201ENST00000436691 102 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 HMGN2P32-201ENST00000444648 269 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 RNU6-717P-201ENST00000459076 104 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 Y_RNA.651-201ENST00000459380 103 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 RNU6-693P-201ENST00000516134 107 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 MIR3129-201ENST00000581095 76 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 AC002984.1-201ENST00000591692 448 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 AC006441.5-201ENST00000612680 209 ntBASIC2.33□□□□□ -2.04
PDE6AP16499 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.33□□□□□ -2.04
PDE6AP16499 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PDE6AP16499 RNU6-508P-201ENST00000363231 103 ntBASIC2.32□□□□□ -2.04
PDE6AP16499 SNORD58C-201ENST00000365223 64 ntBASIC2.32□□□□□ -2.04
PDE6AP16499 SNORA4.2-201ENST00000365313 147 ntBASIC2.32□□□□□ -2.04
PDE6AP16499 RPL23AP63-201ENST00000498752 471 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms