Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SNORD116-21-201ENST00000384507 92 ntBASIC2.17□□□□□ -2.06
COL11A2P13942 AL353689.1-201ENST00000438895 199 ntBASIC2.17□□□□□ -2.06
COL11A2P13942 CYP2C59P-201ENST00000457790 269 ntBASIC2.17□□□□□ -2.06
COL11A2P13942 SNORD33.1-201ENST00000516213 88 ntBASIC2.17□□□□□ -2.06
COL11A2P13942 RNU6-113P-201ENST00000516653 101 ntBASIC2.17□□□□□ -2.06
COL11A2P13942 RNU6-341P-201ENST00000516973 96 ntBASIC2.17□□□□□ -2.06
COL11A2P13942 AC007751.1-201ENST00000529260 376 ntBASIC2.17□□□□□ -2.06
COL11A2P13942 AL022345.2-201ENST00000606307 135 ntBASIC2.17□□□□□ -2.06
COL11A2P13942 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.17□□□□□ -2.06
COL11A2P13942 MIR338-201ENST00000636369 67 ntBASIC2.17□□□□□ -2.06
COL11A2P13942 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.17□□□□□ -2.06
COL11A2P13942 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.16□□□□□ -2.06
COL11A2P13942 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.16□□□□□ -2.06
COL11A2P13942 MIR337-201ENST00000362281 93 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 Y_RNA.85-201ENST00000363014 111 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 MIR518E-201ENST00000385252 88 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 MIRLET7F2-201ENST00000385277 83 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 MIR891A-201ENST00000401237 79 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 HMGN2P34-201ENST00000437647 269 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 Y_RNA.651-201ENST00000459380 103 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 AC025033.1-201ENST00000463883 194 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 RPS26P45-201ENST00000471748 340 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 RNU6-1096P-201ENST00000517089 102 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 AL358944.1-201ENST00000528537 144 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 AL645939.4-201ENST00000604495 135 ntBASIC2.16□□□□□ -2.06
COL11A2P13942 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.16□□□□□ -2.06
COL11A2P13942 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL11A2P13942 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
COL11A2P13942 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
COL11A2P13942 MIR548A2-201ENST00000384956 97 ntBASIC2.15□□□□□ -2.07
COL11A2P13942 AC004965.1-201ENST00000413033 213 ntBASIC2.15□□□□□ -2.07
COL11A2P13942 SNRPGP10-201ENST00000432323 225 ntBASIC2.15□□□□□ -2.07
COL11A2P13942 SEM1P1-201ENST00000506694 209 ntBASIC2.15□□□□□ -2.07
COL11A2P13942 RNU6-412P-201ENST00000516434 106 ntBASIC2.15□□□□□ -2.07
COL11A2P13942 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.15□□□□□ -2.07
COL11A2P13942 AC245060.5-201ENST00000610778 3293 ntBASIC2.15□□□□□ -2.07
COL11A2P13942 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.15□□□□□ -2.07
COL11A2P13942 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL11A2P13942 Y_RNA.528-201ENST00000384575 108 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
COL11A2P13942 AL163195.1-201ENST00000496941 348 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 FO624990.1-201ENST00000636373 85 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 MTND5P18-201ENST00000445624 1801 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL11A2P13942 MIR340-201ENST00000362125 95 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 RNU1-23P-201ENST00000363361 144 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 SNORD61-201ENST00000384252 73 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 MIR218-1-201ENST00000384999 110 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 RNY4P30-201ENST00000410216 95 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 RNA5SP136-201ENST00000410906 107 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 ATP5J2P3-201ENST00000451550 258 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 RPS26P48-201ENST00000491713 339 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.14□□□□□ -2.07
COL11A2P13942 RNU6-1291P-201ENST00000516591 104 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 AL353149.1-201ENST00000610667 244 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 AL137067.1-201ENST00000615933 120 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 AC134878.1-201ENST00000619901 243 ntBASIC2.14□□□□□ -2.07
COL11A2P13942 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.13□□□□□ -2.07
COL11A2P13942 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL11A2P13942 RNU6-1292P-201ENST00000383856 107 ntBASIC2.13□□□□□ -2.07
COL11A2P13942 RNU6-160P-201ENST00000384591 107 ntBASIC2.13□□□□□ -2.07
COL11A2P13942 Y_RNA.540-201ENST00000384638 111 ntBASIC2.13□□□□□ -2.07
COL11A2P13942 MIR1276-201ENST00000408707 83 ntBASIC2.13□□□□□ -2.07
COL11A2P13942 AC099677.2-201ENST00000436385 175 ntBASIC2.13□□□□□ -2.07
COL11A2P13942 MRPS17P9-201ENST00000511924 393 ntBASIC2.13□□□□□ -2.07
COL11A2P13942 Y_RNA.666-201ENST00000516187 112 ntBASIC2.13□□□□□ -2.07
COL11A2P13942 RNU6-781P-201ENST00000516377 101 ntBASIC2.13□□□□□ -2.07
COL11A2P13942 AC008507.4-201ENST00000585464 127 ntBASIC2.13□□□□□ -2.07
COL11A2P13942 BX248123.2-201ENST00000606318 124 ntBASIC2.13□□□□□ -2.07
COL11A2P13942 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL11A2P13942 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL11A2P13942 MIRLET7G-201ENST00000362280 84 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 Y_RNA.253-201ENST00000364562 112 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 Y_RNA.355-201ENST00000365462 98 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 RNU6-442P-201ENST00000383968 104 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 Y_RNA.410-201ENST00000383992 113 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 SRIP3-201ENST00000413200 219 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.12□□□□□ -2.07
COL11A2P13942 FTH1P12-201ENST00000432137 551 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 SNRPGP13-201ENST00000442212 177 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 AC023141.11-201ENST00000508864 202 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 Y_RNA.677-201ENST00000516401 85 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 SNORA48.11-201ENST00000517015 89 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 AC073413.2-201ENST00000604332 360 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 AL449363.1-201ENST00000617815 186 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.12□□□□□ -2.07
COL11A2P13942 U6.108-201ENST00000637764 58 ntBASIC2.12□□□□□ -2.07
COL11A2P13942 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL11A2P13942 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL11A2P13942 RNU6-862P-201ENST00000362804 105 ntBASIC2.11□□□□□ -2.07
COL11A2P13942 Y_RNA.281-201ENST00000364774 94 ntBASIC2.11□□□□□ -2.07
COL11A2P13942 SUMO1P4-201ENST00000429430 302 ntBASIC2.11□□□□□ -2.07
COL11A2P13942 AC233266.1-201ENST00000454518 96 ntBASIC2.11□□□□□ -2.07
COL11A2P13942 RNU6-168P-201ENST00000516189 101 ntBASIC2.11□□□□□ -2.07
COL11A2P13942 MIR3616-201ENST00000584070 92 ntBASIC2.11□□□□□ -2.07
COL11A2P13942 AC242852.1-201ENST00000612151 96 ntBASIC2.11□□□□□ -2.07
COL11A2P13942 AC006441.5-201ENST00000612680 209 ntBASIC2.11□□□□□ -2.07
COL11A2P13942 AC244015.1-201ENST00000622301 99 ntBASIC2.11□□□□□ -2.07
COL11A2P13942 Y_RNA.49-201ENST00000362714 112 ntBASIC2.11□□□□□ -2.07
COL11A2P13942 RNU6-888P-201ENST00000363010 101 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms