Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNY1P11-201ENST00000363759 113 ntBASIC1.78□□□□□ -2.12
HOXC6P09630 RNY1P5-201ENST00000383890 115 ntBASIC1.78□□□□□ -2.12
HOXC6P09630 RNU6-484P-201ENST00000384016 107 ntBASIC1.78□□□□□ -2.12
HOXC6P09630 RNY3P5-201ENST00000384127 102 ntBASIC1.78□□□□□ -2.12
HOXC6P09630 RNA5SP450-201ENST00000411206 102 ntBASIC1.78□□□□□ -2.12
HOXC6P09630 AC107027.2-201ENST00000512197 115 ntBASIC1.78□□□□□ -2.12
HOXC6P09630 AC024995.1-201ENST00000523014 93 ntBASIC1.78□□□□□ -2.12
HOXC6P09630 MIR3910-1-201ENST00000580936 111 ntBASIC1.78□□□□□ -2.12
HOXC6P09630 Pinc.1-201ENST00000616452 154 ntBASIC1.78□□□□□ -2.12
HOXC6P09630 uc_338.20-201ENST00000621563 178 ntBASIC1.78□□□□□ -2.12
HOXC6P09630 AC008555.8-201ENST00000623602 2168 ntBASIC1.78□□□□□ -2.13
HOXC6P09630 MIR126-201ENST00000362291 85 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 Y_RNA.91-201ENST00000363042 107 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 SNORD68-201ENST00000363214 84 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 Y_RNA.118-201ENST00000363300 101 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 SNORA7.1-201ENST00000363750 139 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 Y_RNA.215-201ENST00000364204 112 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 Y_RNA.486-201ENST00000384398 107 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 RNU6-768P-201ENST00000384683 107 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 MIR515-2-201ENST00000384883 83 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 MIR515-1-201ENST00000384884 83 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 MIR562-201ENST00000384894 95 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 SNORD72-201ENST00000390994 80 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 RNU6-131P-201ENST00000391144 107 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 RNA5SP501-201ENST00000410990 112 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 AC245047.3-201ENST00000429428 127 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 AL392103.1-201ENST00000447000 198 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 RNU6-1299P-201ENST00000516316 100 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 SNORA31.10-201ENST00000516482 106 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 RNU7-149P-201ENST00000516739 59 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 SNORA31.24-201ENST00000517232 57 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 MIR4421-201ENST00000578133 69 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 Y_RNA.778-201ENST00000620203 90 ntBASIC1.77□□□□□ -2.13
HOXC6P09630 AP000648.3-201ENST00000623539 4507 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 RNU4-11P-201ENST00000365287 132 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 Y_RNA.337-201ENST00000365312 102 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 SNORA4.2-201ENST00000365313 147 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 Y_RNA.400-201ENST00000383963 111 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 Y_RNA.521-201ENST00000384560 114 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 SNORA20-201ENST00000384662 132 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 RNU6-440P-201ENST00000390882 105 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 RNA5SP465-201ENST00000391195 109 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXC6P09630 SNORD77.4-201ENST00000516158 81 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXC6P09630 MIR6504-201ENST00000613520 61 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 U2.22-201ENST00000636441 106 ntBASIC1.76□□□□□ -2.13
HOXC6P09630 ZNF209P-201ENST00000593450 2304 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HOXC6P09630 RNU6-1019P-201ENST00000364424 107 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 Y_RNA.634-201ENST00000364811 113 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 Y_RNA.432-201ENST00000384087 111 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 MIR522-201ENST00000385071 87 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 RNU6-588P-201ENST00000410281 105 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 RNU4-43P-201ENST00000410628 137 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXC6P09630 AC023449.1-201ENST00000454464 154 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXC6P09630 RNU7-94P-201ENST00000459576 63 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 RNA5SP445-201ENST00000515889 115 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 RNU2-56P-201ENST00000516826 190 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 RNU6-1116P-201ENST00000517269 99 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 AP002004.2-201ENST00000531656 154 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 DNAJC19P2-201ENST00000593340 302 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 MIR8054-201ENST00000620877 86 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 MTND1P7-201ENST00000632801 297 ntBASIC1.75□□□□□ -2.13
HOXC6P09630 RNU6-704P-201ENST00000364162 103 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 RNU6-1082P-201ENST00000364574 107 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 SNORD50B-201ENST00000364995 70 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 Y_RNA.488-201ENST00000384403 102 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 SNORA19-201ENST00000384737 128 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 RNU11-5P-201ENST00000391216 129 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 RNU2-70P-201ENST00000410718 179 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 HSPE1P9-201ENST00000440046 311 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 OR9P1P-201ENST00000496431 281 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 SNORA25.12-201ENST00000516202 82 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 RNU6-426P-201ENST00000516464 97 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 RNU6-406P-201ENST00000516470 107 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 RNU6-197P-201ENST00000516680 100 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXC6P09630 MIR378D2-201ENST00000580636 98 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 AC120024.3-201ENST00000603167 156 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 AC069114.2-201ENST00000604699 304 ntBASIC1.74□□□□□ -2.13
HOXC6P09630 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HOXC6P09630 Y_RNA.265-201ENST00000364677 108 ntBASIC1.73□□□□□ -2.13
HOXC6P09630 Y_RNA.497-201ENST00000384447 98 ntBASIC1.73□□□□□ -2.13
HOXC6P09630 MIR569-201ENST00000385228 96 ntBASIC1.73□□□□□ -2.13
HOXC6P09630 MIR613-201ENST00000385248 95 ntBASIC1.73□□□□□ -2.13
HOXC6P09630 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HOXC6P09630 SNORD37.2-201ENST00000391075 66 ntBASIC1.73□□□□□ -2.13
HOXC6P09630 SNORA79-201ENST00000408376 140 ntBASIC1.73□□□□□ -2.13
HOXC6P09630 RNU2-55P-201ENST00000411146 174 ntBASIC1.73□□□□□ -2.13
HOXC6P09630 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.73□□□□□ -2.13
HOXC6P09630 STAG3L5P-204ENST00000443759 179 ntBASIC1.73□□□□□ -2.13
HOXC6P09630 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.73□□□□□ -2.13
HOXC6P09630 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.73□□□□□ -2.13
HOXC6P09630 AL358944.1-201ENST00000528537 144 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms