Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 Y_RNA.563-201ENST00000384707 108 ntBASIC2.4□□□□□ -2.03
CHGBP05060 MIR515-2-201ENST00000384883 83 ntBASIC2.4□□□□□ -2.03
CHGBP05060 MIR515-1-201ENST00000384884 83 ntBASIC2.4□□□□□ -2.03
CHGBP05060 MIR891A-201ENST00000401237 79 ntBASIC2.4□□□□□ -2.03
CHGBP05060 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.4□□□□□ -2.03
CHGBP05060 BX510359.4-201ENST00000423750 193 ntBASIC2.4□□□□□ -2.03
CHGBP05060 AF228730.3-201ENST00000436691 102 ntBASIC2.4□□□□□ -2.03
CHGBP05060 RNU6-717P-201ENST00000459076 104 ntBASIC2.4□□□□□ -2.03
CHGBP05060 RPS26P45-201ENST00000471748 340 ntBASIC2.4□□□□□ -2.03
CHGBP05060 SNORA31.25-201ENST00000517242 134 ntBASIC2.4□□□□□ -2.03
CHGBP05060 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.4□□□□□ -2.03
CHGBP05060 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.4□□□□□ -2.03
CHGBP05060 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHGBP05060 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHGBP05060 RNU6-834P-201ENST00000362367 110 ntBASIC2.39□□□□□ -2.03
CHGBP05060 SNORD14E-201ENST00000364009 85 ntBASIC2.39□□□□□ -2.03
CHGBP05060 MIR597-201ENST00000384968 97 ntBASIC2.39□□□□□ -2.03
CHGBP05060 RN7SKP284-201ENST00000411002 343 ntBASIC2.39□□□□□ -2.03
CHGBP05060 FTH1P12-201ENST00000432137 551 ntBASIC2.39□□□□□ -2.03
CHGBP05060 RNU6-1149P-201ENST00000516810 97 ntBASIC2.39□□□□□ -2.03
CHGBP05060 AC024995.1-201ENST00000523014 93 ntBASIC2.39□□□□□ -2.03
CHGBP05060 AL358944.1-201ENST00000528537 144 ntBASIC2.39□□□□□ -2.03
CHGBP05060 AL121890.5-201ENST00000620848 304 ntBASIC2.39□□□□□ -2.03
CHGBP05060 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHGBP05060 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CHGBP05060 RNU6-888P-201ENST00000363010 101 ntBASIC2.38□□□□□ -2.03
CHGBP05060 RNU6-647P-201ENST00000364243 107 ntBASIC2.38□□□□□ -2.03
CHGBP05060 RNU6-153P-201ENST00000364422 104 ntBASIC2.38□□□□□ -2.03
CHGBP05060 SNORD58C-201ENST00000365223 64 ntBASIC2.38□□□□□ -2.03
CHGBP05060 MIR548A2-201ENST00000384956 97 ntBASIC2.38□□□□□ -2.03
CHGBP05060 MIR764-201ENST00000390811 85 ntBASIC2.38□□□□□ -2.03
CHGBP05060 SNORD77.3-201ENST00000391113 65 ntBASIC2.38□□□□□ -2.03
CHGBP05060 MIR1263-201ENST00000408324 86 ntBASIC2.38□□□□□ -2.03
CHGBP05060 MTATP6P21-201ENST00000440681 189 ntBASIC2.38□□□□□ -2.03
CHGBP05060 STAG3L5P-204ENST00000443759 179 ntBASIC2.38□□□□□ -2.03
CHGBP05060 Y_RNA.651-201ENST00000459380 103 ntBASIC2.38□□□□□ -2.03
CHGBP05060 RNA5SP137-201ENST00000516833 135 ntBASIC2.38□□□□□ -2.03
CHGBP05060 MIR5094-201ENST00000578766 85 ntBASIC2.38□□□□□ -2.03
CHGBP05060 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.38□□□□□ -2.03
CHGBP05060 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CHGBP05060 Y_RNA.280-201ENST00000364765 112 ntBASIC2.37□□□□□ -2.03
CHGBP05060 SNORD24-201ENST00000383884 75 ntBASIC2.37□□□□□ -2.03
CHGBP05060 SNORA22-201ENST00000383907 134 ntBASIC2.37□□□□□ -2.03
CHGBP05060 MIR518F-201ENST00000384973 87 ntBASIC2.37□□□□□ -2.03
CHGBP05060 MIR548A3-201ENST00000385297 97 ntBASIC2.37□□□□□ -2.03
CHGBP05060 RNY4P18-201ENST00000391107 89 ntBASIC2.37□□□□□ -2.03
CHGBP05060 MIR548O-201ENST00000408583 114 ntBASIC2.37□□□□□ -2.03
CHGBP05060 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.37□□□□□ -2.03
CHGBP05060 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.37□□□□□ -2.03
CHGBP05060 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.37□□□□□ -2.03
CHGBP05060 snoU13.26-201ENST00000459452 105 ntBASIC2.37□□□□□ -2.03
CHGBP05060 RPS29P11-201ENST00000496507 171 ntBASIC2.37□□□□□ -2.03
CHGBP05060 AC121758.2-201ENST00000553271 193 ntBASIC2.37□□□□□ -2.03
CHGBP05060 AC078899.2-201ENST00000595282 212 ntBASIC2.37□□□□□ -2.03
CHGBP05060 AC022513.1-201ENST00000624512 117 ntBASIC2.37□□□□□ -2.03
CHGBP05060 U6.95-201ENST00000636931 70 ntBASIC2.37□□□□□ -2.03
CHGBP05060 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHGBP05060 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.37□□□□□ -2.03
CHGBP05060 snoU2-30.1-201ENST00000365012 70 ntBASIC2.36□□□□□ -2.03
CHGBP05060 RNU6-442P-201ENST00000383968 104 ntBASIC2.36□□□□□ -2.03
CHGBP05060 SNORA6-201ENST00000384033 151 ntBASIC2.36□□□□□ -2.03
CHGBP05060 MIR548A1-201ENST00000385041 97 ntBASIC2.36□□□□□ -2.03
CHGBP05060 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.36□□□□□ -2.03
CHGBP05060 AC055731.1-201ENST00000474387 401 ntBASIC2.36□□□□□ -2.03
CHGBP05060 PDCD5P2-201ENST00000507570 312 ntBASIC2.36□□□□□ -2.03
CHGBP05060 RN7SKP19-201ENST00000516016 252 ntBASIC2.36□□□□□ -2.03
CHGBP05060 RNU7-25P-201ENST00000516544 62 ntBASIC2.36□□□□□ -2.03
CHGBP05060 SNORD45.4-201ENST00000516629 73 ntBASIC2.36□□□□□ -2.03
CHGBP05060 RNU6-1116P-201ENST00000517269 99 ntBASIC2.36□□□□□ -2.03
CHGBP05060 AC087685.1-201ENST00000587507 141 ntBASIC2.36□□□□□ -2.03
CHGBP05060 MIR376A2-201ENST00000636782 80 ntBASIC2.36□□□□□ -2.03
CHGBP05060 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.36□□□□□ -2.03
CHGBP05060 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHGBP05060 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHGBP05060 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHGBP05060 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
CHGBP05060 RNU1-58P-201ENST00000362413 163 ntBASIC2.35□□□□□ -2.03
CHGBP05060 RNU11-3P-201ENST00000391111 133 ntBASIC2.35□□□□□ -2.03
CHGBP05060 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.35□□□□□ -2.03
CHGBP05060 MIR5694-201ENST00000581190 76 ntBASIC2.35□□□□□ -2.03
CHGBP05060 AL670379.3-201ENST00000605040 251 ntBASIC2.35□□□□□ -2.03
CHGBP05060 AC025166.1-201ENST00000612411 163 ntBASIC2.35□□□□□ -2.03
CHGBP05060 AC015726.2-201ENST00000620112 122 ntBASIC2.35□□□□□ -2.03
CHGBP05060 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CHGBP05060 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.03
CHGBP05060 RNU6-1292P-201ENST00000383856 107 ntBASIC2.34□□□□□ -2.03
CHGBP05060 RNU6-440P-201ENST00000390882 105 ntBASIC2.34□□□□□ -2.03
CHGBP05060 HMGN2P39-201ENST00000398005 273 ntBASIC2.34□□□□□ -2.03
CHGBP05060 Y_RNA.617-201ENST00000410920 90 ntBASIC2.34□□□□□ -2.03
CHGBP05060 Y_RNA.709-201ENST00000516952 92 ntBASIC2.34□□□□□ -2.03
CHGBP05060 RNU2-19P-201ENST00000517288 84 ntBASIC2.34□□□□□ -2.03
CHGBP05060 AC084364.2-201ENST00000546924 395 ntBASIC2.34□□□□□ -2.03
CHGBP05060 RNU6-268P-201ENST00000364174 107 ntBASIC2.33□□□□□ -2.04
CHGBP05060 Y_RNA.242-201ENST00000364473 110 ntBASIC2.33□□□□□ -2.04
CHGBP05060 RNA5SP37-201ENST00000365420 130 ntBASIC2.33□□□□□ -2.04
CHGBP05060 SNORA2.2-201ENST00000365473 135 ntBASIC2.33□□□□□ -2.04
CHGBP05060 SNORD116-21-201ENST00000384507 92 ntBASIC2.33□□□□□ -2.04
CHGBP05060 U8.13-201ENST00000390842 128 ntBASIC2.33□□□□□ -2.04
CHGBP05060 RNA5SP482-201ENST00000391269 118 ntBASIC2.33□□□□□ -2.04
CHGBP05060 IGKV1-22-201ENST00000524313 326 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms