Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.63□□□□□ -2.15
COL2A1P02458 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
COL2A1P02458 Y_RNA.273-201ENST00000364703 102 ntBASIC1.62□□□□□ -2.15
COL2A1P02458 Y_RNA.361-201ENST00000365515 120 ntBASIC1.62□□□□□ -2.15
COL2A1P02458 Y_RNA.584-201ENST00000391090 114 ntBASIC1.62□□□□□ -2.15
COL2A1P02458 AC016909.1-201ENST00000415916 166 ntBASIC1.62□□□□□ -2.15
COL2A1P02458 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.62□□□□□ -2.15
COL2A1P02458 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.62□□□□□ -2.15
COL2A1P02458 PDCD5P2-201ENST00000507570 312 ntBASIC1.62□□□□□ -2.15
COL2A1P02458 AC025647.1-201ENST00000517879 253 ntBASIC1.62□□□□□ -2.15
COL2A1P02458 AC090142.3-201ENST00000519012 385 ntBASIC1.62□□□□□ -2.15
COL2A1P02458 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
COL2A1P02458 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.61□□□□□ -2.15
COL2A1P02458 RNU1-72P-201ENST00000362976 153 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 RNU6-376P-201ENST00000384731 106 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 RNU6-1186P-201ENST00000410429 97 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 RPL30P4-201ENST00000429309 333 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 AC233266.1-201ENST00000454518 96 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 RPS26P55-201ENST00000471178 356 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 RNU6-586P-201ENST00000517265 104 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.61□□□□□ -2.15
COL2A1P02458 AC133485.4-201ENST00000561835 220 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 AC127455.1-201ENST00000565496 145 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 AC138907.4-201ENST00000570107 226 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 FAM106DP-201ENST00000586416 501 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 AC242852.1-201ENST00000612151 96 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 AC244015.1-201ENST00000622301 99 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.61□□□□□ -2.15
COL2A1P02458 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
COL2A1P02458 RNU1-105P-201ENST00000363470 161 ntBASIC1.6□□□□□ -2.15
COL2A1P02458 RNU6-1056P-201ENST00000383996 107 ntBASIC1.6□□□□□ -2.15
COL2A1P02458 RNU6-1072P-201ENST00000384703 107 ntBASIC1.6□□□□□ -2.15
COL2A1P02458 RNU6-443P-201ENST00000384780 107 ntBASIC1.6□□□□□ -2.15
COL2A1P02458 RNY4P18-201ENST00000391107 89 ntBASIC1.6□□□□□ -2.15
COL2A1P02458 RNU2-32P-201ENST00000411193 191 ntBASIC1.6□□□□□ -2.15
COL2A1P02458 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.6□□□□□ -2.15
COL2A1P02458 HSPE1P13-201ENST00000451143 297 ntBASIC1.6□□□□□ -2.15
COL2A1P02458 RNU6-221P-201ENST00000459541 99 ntBASIC1.6□□□□□ -2.15
COL2A1P02458 RNU6-948P-201ENST00000516374 107 ntBASIC1.6□□□□□ -2.15
COL2A1P02458 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.6□□□□□ -2.15
COL2A1P02458 Pinc.1-201ENST00000616452 154 ntBASIC1.6□□□□□ -2.15
COL2A1P02458 AL596028.1-201ENST00000326971 197 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 RNU1-23P-201ENST00000363361 144 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 RNU6-1209P-201ENST00000363655 107 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 SNORD114-27-201ENST00000363766 70 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 SNORD31B-201ENST00000364977 69 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 RNU6-1323P-201ENST00000384025 107 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 SNORA40.5-201ENST00000391061 128 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 RNA5SP467-201ENST00000391274 118 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 SNORA75.5-201ENST00000391291 81 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 SNORA79-201ENST00000408376 140 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 MIR548J-201ENST00000408833 112 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 RNU6-1064P-201ENST00000410626 104 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 RNU2-70P-201ENST00000410718 179 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 SNRPGP13-201ENST00000442212 177 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 AC010531.2-201ENST00000465012 153 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 RNA5SP436-201ENST00000516020 115 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 RNU6-1299P-201ENST00000516316 100 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 MIR4658-201ENST00000584344 65 ntBASIC1.59□□□□□ -2.15
COL2A1P02458 CENPCP1-201ENST00000533085 2578 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 Y_RNA.114-201ENST00000363265 113 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 SNORA25.7-201ENST00000364375 127 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 RNU6-1240P-201ENST00000365155 104 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 RNU6-484P-201ENST00000384016 107 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 Y_RNA.432-201ENST00000384087 111 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 Y_RNA.486-201ENST00000384398 107 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 MIR548A1-201ENST00000385041 97 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 MIR29B2-201ENST00000385055 81 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 MIR524-201ENST00000385242 87 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 SNORA12.1-201ENST00000390873 148 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 SNORA40.6-201ENST00000391153 128 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 MIR300-201ENST00000401138 83 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 AL158823.1-201ENST00000418441 478 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 RNA5SP112-201ENST00000515937 99 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 RNU6-781P-201ENST00000516377 101 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 RNU7-172P-201ENST00000517125 64 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 MIR3646-201ENST00000578301 84 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 MIR4438-201ENST00000585271 93 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 AP001340.1-201ENST00000624405 217 ntBASIC1.58□□□□□ -2.16
COL2A1P02458 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL2A1P02458 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
COL2A1P02458 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.58□□□□□ -2.16
COL2A1P02458 Y_RNA.203-201ENST00000364106 102 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 RNU6-1164P-201ENST00000364428 107 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 RNU6-117P-201ENST00000365415 107 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 RNU6-546P-201ENST00000383991 107 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 HMGN2P34-201ENST00000437647 269 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 RNU6-772P-201ENST00000516042 105 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 RNU6-1041P-201ENST00000516254 102 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 RNU6-1291P-201ENST00000516591 104 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 AC090049.2-201ENST00000550377 109 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 MIR3121-201ENST00000579680 77 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 U7.2-201ENST00000607576 63 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 uc_338.4-201ENST00000616635 176 ntBASIC1.57□□□□□ -2.16
COL2A1P02458 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.57□□□□□ -2.16
COL2A1P02458 Y_RNA.267-201ENST00000364679 109 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 Y_RNA.634-201ENST00000364811 113 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 SNORA1-201ENST00000384107 130 ntBASIC1.56□□□□□ -2.16
COL2A1P02458 RNU6-476P-201ENST00000384726 107 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms