Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CALM2P4-201ENST00000430810 426 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 AC092991.1-201ENST00000477176 376 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 CYCTP-201ENST00000504253 315 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 RNA5SP168-201ENST00000516642 112 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 SNORA44.1-201ENST00000517031 108 ntBASIC1.34□□□□□ -2.19
CLDN1O95832 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CLDN1O95832 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
CLDN1O95832 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CLDN1O95832 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
CLDN1O95832 RNU4-10P-201ENST00000364383 140 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 RNU4-17P-201ENST00000365598 141 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 Y_RNA.552-201ENST00000384665 112 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 MIR520E-201ENST00000384867 87 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 MIR1267-201ENST00000408723 78 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 MIR1298-201ENST00000408783 112 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 RNU1-98P-201ENST00000458992 160 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 RPS29P1-201ENST00000465274 159 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CLDN1O95832 RPL23AP91-201ENST00000569211 455 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 AC120024.3-201ENST00000603167 156 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 MIR6078-201ENST00000611069 100 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 AL391903.3-201ENST00000612158 163 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 JPX_2.1-201ENST00000614161 69 ntBASIC1.33□□□□□ -2.2
CLDN1O95832 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.33□□□□□ -2.2
CLDN1O95832 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.33□□□□□ -2.2
CLDN1O95832 RNU6-833P-201ENST00000363486 107 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 Y_RNA.200-201ENST00000364018 102 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 snoU2_19.4-201ENST00000364329 80 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 Y_RNA.229-201ENST00000364347 113 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 Y_RNA.435-201ENST00000384095 112 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 MIR616-201ENST00000385293 97 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 RNU6-131P-201ENST00000391144 107 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 RNU6-388P-201ENST00000517012 105 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 RNU6-389P-201ENST00000517048 105 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 AC130289.1-201ENST00000577321 73 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 AC008507.4-201ENST00000585464 127 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 AC078938.1-201ENST00000620993 318 ntBASIC1.32□□□□□ -2.2
CLDN1O95832 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLDN1O95832 AP000648.3-201ENST00000623539 4507 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 MIR411-201ENST00000362239 96 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 SNORD68-201ENST00000363214 84 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 RNU6-1138P-201ENST00000365359 106 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 Y_RNA.572-201ENST00000384757 98 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 RNU6-847P-201ENST00000411115 108 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 SNRPGP14-201ENST00000435400 219 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.31□□□□□ -2.2
CLDN1O95832 AC005908.1-201ENST00000468701 347 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 AC023790.1-201ENST00000482174 347 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.31□□□□□ -2.2
CLDN1O95832 RN7SKP164-201ENST00000516138 266 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 SNORD77.4-201ENST00000516158 81 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 Y_RNA.714-201ENST00000517065 90 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 RNU6-1223P-201ENST00000517124 104 ntBASIC1.31□□□□□ -2.2
CLDN1O95832 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.31□□□□□ -2.2
CLDN1O95832 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLDN1O95832 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CLDN1O95832 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLDN1O95832 Y_RNA.24-201ENST00000362508 103 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 Y_RNA.199-201ENST00000364014 102 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 Y_RNA.257-201ENST00000364596 102 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 Y_RNA.274-201ENST00000364714 101 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 SNORD50B-201ENST00000364995 70 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 RNY3P5-201ENST00000384127 102 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 RNU6-955P-201ENST00000410497 104 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 AL354695.1-201ENST00000427935 228 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 HMGN2P32-201ENST00000444648 269 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 AC245047.8-201ENST00000456455 284 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.3□□□□□ -2.2
CLDN1O95832 MIR4308-201ENST00000580634 81 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 Z83818.1-201ENST00000603584 150 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 uc_338.4-201ENST00000616635 176 ntBASIC1.3□□□□□ -2.2
CLDN1O95832 RNU6-103P-201ENST00000363686 107 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 SNORD114-27-201ENST00000363766 70 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 RNU6-200P-201ENST00000364743 107 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 snoU2-30.1-201ENST00000365012 70 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 Y_RNA.336-201ENST00000365307 109 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 Y_RNA.515-201ENST00000384535 112 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 AC114811.1-201ENST00000507207 168 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 SCARNA8-201ENST00000515924 131 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 SNORD45.4-201ENST00000516629 73 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 Y_RNA.700-201ENST00000516806 100 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN1O95832 FAM106DP-201ENST00000586416 501 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 SNORD3E-202ENST00000627253 216 ntBASIC1.29□□□□□ -2.2
CLDN1O95832 Y_RNA.83-201ENST00000363005 113 ntBASIC1.28□□□□□ -2.2
CLDN1O95832 Y_RNA.121-201ENST00000363309 113 ntBASIC1.28□□□□□ -2.2
CLDN1O95832 Y_RNA.242-201ENST00000364473 110 ntBASIC1.28□□□□□ -2.2
CLDN1O95832 MIR513A1-201ENST00000385138 129 ntBASIC1.28□□□□□ -2.2
CLDN1O95832 MIR653-201ENST00000385279 96 ntBASIC1.28□□□□□ -2.2
CLDN1O95832 MIR891A-201ENST00000401237 79 ntBASIC1.28□□□□□ -2.2
CLDN1O95832 RNU2-55P-201ENST00000411146 174 ntBASIC1.28□□□□□ -2.2
CLDN1O95832 RNU6-1007P-201ENST00000516586 107 ntBASIC1.28□□□□□ -2.2
CLDN1O95832 RNU6-794P-201ENST00000517261 64 ntBASIC1.28□□□□□ -2.2
CLDN1O95832 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.28□□□□□ -2.2
CLDN1O95832 MIR3671-201ENST00000580455 88 ntBASIC1.28□□□□□ -2.2
CLDN1O95832 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.27□□□□□ -2.21
CLDN1O95832 Y_RNA.308-201ENST00000365043 101 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 RNU6-484P-201ENST00000384016 107 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms