Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RN7SKP164-201ENST00000516138 266 ntBASIC1.28□□□□□ -2.2
NKX2-2O95096 RNU6-126P-201ENST00000516685 103 ntBASIC1.28□□□□□ -2.2
NKX2-2O95096 SNORA18.7-201ENST00000516910 131 ntBASIC1.28□□□□□ -2.2
NKX2-2O95096 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.28□□□□□ -2.2
NKX2-2O95096 MIR3149-201ENST00000584629 83 ntBASIC1.28□□□□□ -2.2
NKX2-2O95096 Pinc.1-201ENST00000616452 154 ntBASIC1.28□□□□□ -2.2
NKX2-2O95096 AL161722.3-201ENST00000605789 2983 ntBASIC1.27□□□□□ -2.21
NKX2-2O95096 RNY3P5-201ENST00000384127 102 ntBASIC1.27□□□□□ -2.21
NKX2-2O95096 Y_RNA.587-201ENST00000391210 103 ntBASIC1.27□□□□□ -2.21
NKX2-2O95096 AC245047.7-201ENST00000440265 293 ntBASIC1.27□□□□□ -2.21
NKX2-2O95096 COX6CP14-201ENST00000469580 174 ntBASIC1.27□□□□□ -2.21
NKX2-2O95096 SNORD116-28-201ENST00000516123 91 ntBASIC1.27□□□□□ -2.21
NKX2-2O95096 AL391903.3-201ENST00000612158 163 ntBASIC1.27□□□□□ -2.21
NKX2-2O95096 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.27□□□□□ -2.21
NKX2-2O95096 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.27□□□□□ -2.21
NKX2-2O95096 ZNF209P-201ENST00000593450 2304 ntBASIC1.27□□□□□ -2.21
NKX2-2O95096 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
NKX2-2O95096 Y_RNA.262-201ENST00000364641 102 ntBASIC1.26□□□□□ -2.21
NKX2-2O95096 Y_RNA.292-201ENST00000364904 97 ntBASIC1.26□□□□□ -2.21
NKX2-2O95096 MIR616-201ENST00000385293 97 ntBASIC1.26□□□□□ -2.21
NKX2-2O95096 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.26□□□□□ -2.21
NKX2-2O95096 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.26□□□□□ -2.21
NKX2-2O95096 SNORA31.2-201ENST00000516019 134 ntBASIC1.26□□□□□ -2.21
NKX2-2O95096 RNU6-947P-201ENST00000516264 106 ntBASIC1.26□□□□□ -2.21
NKX2-2O95096 MIR4764-201ENST00000580680 88 ntBASIC1.26□□□□□ -2.21
NKX2-2O95096 AL353997.5-201ENST00000618886 171 ntBASIC1.26□□□□□ -2.21
NKX2-2O95096 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
NKX2-2O95096 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
NKX2-2O95096 snoU2_19.4-201ENST00000364329 80 ntBASIC1.25□□□□□ -2.21
NKX2-2O95096 Y_RNA.539-201ENST00000384635 107 ntBASIC1.25□□□□□ -2.21
NKX2-2O95096 MIR520C-201ENST00000385005 87 ntBASIC1.25□□□□□ -2.21
NKX2-2O95096 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
NKX2-2O95096 RNU6-381P-201ENST00000391259 108 ntBASIC1.25□□□□□ -2.21
NKX2-2O95096 RNU2-55P-201ENST00000411146 174 ntBASIC1.25□□□□□ -2.21
NKX2-2O95096 AC048334.1-201ENST00000477975 159 ntBASIC1.25□□□□□ -2.21
NKX2-2O95096 SNORA31.4-201ENST00000516049 129 ntBASIC1.25□□□□□ -2.21
NKX2-2O95096 AC004817.2-201ENST00000561794 651 ntBASIC1.25□□□□□ -2.21
NKX2-2O95096 MIR3192-201ENST00000584920 77 ntBASIC1.25□□□□□ -2.21
NKX2-2O95096 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
NKX2-2O95096 SNORD27-201ENST00000363981 72 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 RNY4P28-201ENST00000365281 93 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 RNU4-17P-201ENST00000365598 141 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 RNU6-574P-201ENST00000384265 107 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 Y_RNA.486-201ENST00000384398 107 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 RNU4-62P-201ENST00000410125 130 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.24□□□□□ -2.21
NKX2-2O95096 snoU13.25-201ENST00000458945 104 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 SCARNA8-201ENST00000515924 131 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 RNU4-57P-201ENST00000515980 135 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 RNU6-1023P-201ENST00000516137 106 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 MIR3128-201ENST00000581957 66 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 AC015726.2-201ENST00000620112 122 ntBASIC1.24□□□□□ -2.21
NKX2-2O95096 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.24□□□□□ -2.21
NKX2-2O95096 SNORD24-201ENST00000383884 75 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 Y_RNA.477-201ENST00000384352 108 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 U8.17-201ENST00000391292 132 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 MIR548O-201ENST00000408583 114 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.23□□□□□ -2.21
NKX2-2O95096 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.23□□□□□ -2.21
NKX2-2O95096 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 AL133373.1-201ENST00000497098 94 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.23□□□□□ -2.21
NKX2-2O95096 RNU7-41P-201ENST00000515917 61 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 Y_RNA.673-201ENST00000516306 88 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 Y_RNA.680-201ENST00000516441 93 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 RNU7-25P-201ENST00000516544 62 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 MIR548AR-201ENST00000582191 57 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 AL512598.1-201ENST00000610158 273 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 MIR7974-201ENST00000615835 79 ntBASIC1.23□□□□□ -2.21
NKX2-2O95096 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 RNA5SP48-201ENST00000363969 126 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 Y_RNA.269-201ENST00000364685 89 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 RNU6-484P-201ENST00000384016 107 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 Y_RNA.447-201ENST00000384184 113 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 Y_RNA.547-201ENST00000384654 119 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 RNU6-1228P-201ENST00000391014 107 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.22□□□□□ -2.21
NKX2-2O95096 Y_RNA.666-201ENST00000516187 112 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 RNU6-453P-201ENST00000516819 85 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 AP003716.2-201ENST00000528260 108 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 MIR4524B-201ENST00000581569 115 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 PRELID3BP2-201ENST00000605362 201 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 AL022345.2-201ENST00000606307 135 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 MIR6715A-201ENST00000615929 79 ntBASIC1.22□□□□□ -2.21
NKX2-2O95096 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
NKX2-2O95096 Y_RNA.60-201ENST00000362831 98 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 Y_RNA.307-201ENST00000365022 117 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 SNORA1.2-201ENST00000365189 134 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 MT-TT-201ENST00000387460 66 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 SNORD28B-201ENST00000390993 75 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 snosnR66.1-201ENST00000391095 99 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 AL606845.1-201ENST00000404881 255 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 AC108667.1-201ENST00000428618 249 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 RNU7-95P-201ENST00000459222 64 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 RNU4-71P-201ENST00000516258 113 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 RNU6-1299P-201ENST00000516316 100 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 RNA5SP153-201ENST00000516498 76 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms