Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 STAG3L5P-204ENST00000443759 179 ntBASIC1.95□□□□□ -2.1
USP1O94782 AL049830.1-201ENST00000468034 425 ntBASIC1.95□□□□□ -2.1
USP1O94782 RNU6-237P-201ENST00000515985 71 ntBASIC1.95□□□□□ -2.1
USP1O94782 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.95□□□□□ -2.1
USP1O94782 MIR548X2-201ENST00000579776 100 ntBASIC1.95□□□□□ -2.1
USP1O94782 MIR378D2-201ENST00000580636 98 ntBASIC1.95□□□□□ -2.1
USP1O94782 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
USP1O94782 AC103810.8-201ENST00000607347 118 ntBASIC1.95□□□□□ -2.1
USP1O94782 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USP1O94782 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
USP1O94782 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
USP1O94782 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USP1O94782 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
USP1O94782 SNORD50.2-201ENST00000365465 70 ntBASIC1.94□□□□□ -2.1
USP1O94782 Y_RNA.420-201ENST00000384043 110 ntBASIC1.94□□□□□ -2.1
USP1O94782 MIR522-201ENST00000385071 87 ntBASIC1.94□□□□□ -2.1
USP1O94782 RNU6-440P-201ENST00000390882 105 ntBASIC1.94□□□□□ -2.1
USP1O94782 RNU6-257P-201ENST00000410238 98 ntBASIC1.94□□□□□ -2.1
USP1O94782 RN7SKP200-201ENST00000410564 320 ntBASIC1.94□□□□□ -2.1
USP1O94782 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.94□□□□□ -2.1
USP1O94782 RNU7-197P-201ENST00000458836 62 ntBASIC1.94□□□□□ -2.1
USP1O94782 AC092991.1-201ENST00000477176 376 ntBASIC1.94□□□□□ -2.1
USP1O94782 AC007751.1-201ENST00000529260 376 ntBASIC1.94□□□□□ -2.1
USP1O94782 AC008507.4-201ENST00000585464 127 ntBASIC1.94□□□□□ -2.1
USP1O94782 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
USP1O94782 AC097639.2-201ENST00000603159 172 ntBASIC1.94□□□□□ -2.1
USP1O94782 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.94□□□□□ -2.1
USP1O94782 AC091895.1-201ENST00000624494 256 ntBASIC1.94□□□□□ -2.1
USP1O94782 ICE2P2-201ENST00000483823 2787 ntBASIC1.94□□□□□ -2.1
USP1O94782 RNA5SP432-201ENST00000362480 116 ntBASIC1.93□□□□□ -2.1
USP1O94782 RNU6-1138P-201ENST00000365359 106 ntBASIC1.93□□□□□ -2.1
USP1O94782 Y_RNA.586-201ENST00000391146 98 ntBASIC1.93□□□□□ -2.1
USP1O94782 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
USP1O94782 RPL31P63-201ENST00000422565 375 ntBASIC1.93□□□□□ -2.1
USP1O94782 AC023449.1-201ENST00000454464 154 ntBASIC1.93□□□□□ -2.1
USP1O94782 RNU7-28P-201ENST00000516759 62 ntBASIC1.93□□□□□ -2.1
USP1O94782 RNU6-1270P-201ENST00000517128 108 ntBASIC1.93□□□□□ -2.1
USP1O94782 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
USP1O94782 AP001485.1-201ENST00000604799 199 ntBASIC1.93□□□□□ -2.1
USP1O94782 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.93□□□□□ -2.1
USP1O94782 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
USP1O94782 MIR6844-201ENST00000637122 62 ntBASIC1.93□□□□□ -2.1
USP1O94782 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
USP1O94782 AC010332.2-201ENST00000613083 1904 ntBASIC1.92□□□□□ -2.1
USP1O94782 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
USP1O94782 Y_RNA.66-201ENST00000362862 102 ntBASIC1.92□□□□□ -2.1
USP1O94782 SNORA75.5-201ENST00000391291 81 ntBASIC1.92□□□□□ -2.1
USP1O94782 MIR513C-201ENST00000401352 84 ntBASIC1.92□□□□□ -2.1
USP1O94782 RNU2-55P-201ENST00000411146 174 ntBASIC1.92□□□□□ -2.1
USP1O94782 AL606753.1-201ENST00000427435 87 ntBASIC1.92□□□□□ -2.1
USP1O94782 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.92□□□□□ -2.1
USP1O94782 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.92□□□□□ -2.1
USP1O94782 AC108210.2-201ENST00000503681 201 ntBASIC1.92□□□□□ -2.1
USP1O94782 RNU6-1116P-201ENST00000517269 99 ntBASIC1.92□□□□□ -2.1
USP1O94782 MIR4709-201ENST00000577272 72 ntBASIC1.92□□□□□ -2.1
USP1O94782 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
USP1O94782 Y_RNA.265-201ENST00000364677 108 ntBASIC1.91□□□□□ -2.1
USP1O94782 RNU6-1031P-201ENST00000384773 107 ntBASIC1.91□□□□□ -2.1
USP1O94782 RPL30P13-201ENST00000418873 348 ntBASIC1.91□□□□□ -2.1
USP1O94782 MTND4LP9-201ENST00000427694 174 ntBASIC1.91□□□□□ -2.1
USP1O94782 AL591806.2-201ENST00000433122 173 ntBASIC1.91□□□□□ -2.1
USP1O94782 Y_RNA.666-201ENST00000516187 112 ntBASIC1.91□□□□□ -2.1
USP1O94782 SNORA28-201ENST00000606769 126 ntBASIC1.91□□□□□ -2.1
USP1O94782 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.91□□□□□ -2.1
USP1O94782 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
USP1O94782 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USP1O94782 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
USP1O94782 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
USP1O94782 SNORD50B-201ENST00000364995 70 ntBASIC1.9□□□□□ -2.11
USP1O94782 SNORD113-1-201ENST00000365321 69 ntBASIC1.9□□□□□ -2.11
USP1O94782 RNU6-597P-201ENST00000365620 102 ntBASIC1.9□□□□□ -2.11
USP1O94782 RNA5SP482-201ENST00000391269 118 ntBASIC1.9□□□□□ -2.11
USP1O94782 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.9□□□□□ -2.11
USP1O94782 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.9□□□□□ -2.11
USP1O94782 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.9□□□□□ -2.11
USP1O94782 AC099513.1-201ENST00000490423 301 ntBASIC1.9□□□□□ -2.11
USP1O94782 RNA5SP153-201ENST00000516498 76 ntBASIC1.9□□□□□ -2.11
USP1O94782 AL160236.1-201ENST00000556317 195 ntBASIC1.9□□□□□ -2.11
USP1O94782 MIR4769-201ENST00000584126 77 ntBASIC1.9□□□□□ -2.11
USP1O94782 U8.5-201ENST00000364528 136 ntBASIC1.89□□□□□ -2.11
USP1O94782 Y_RNA.251-201ENST00000364551 99 ntBASIC1.89□□□□□ -2.11
USP1O94782 SNORA1-201ENST00000384107 130 ntBASIC1.89□□□□□ -2.11
USP1O94782 Y_RNA.542-201ENST00000384641 111 ntBASIC1.89□□□□□ -2.11
USP1O94782 MIR194-1-201ENST00000384892 85 ntBASIC1.89□□□□□ -2.11
USP1O94782 MIR548A2-201ENST00000384956 97 ntBASIC1.89□□□□□ -2.11
USP1O94782 AL034345.1-201ENST00000407768 123 ntBASIC1.89□□□□□ -2.11
USP1O94782 AL161935.2-201ENST00000414627 60 ntBASIC1.89□□□□□ -2.11
USP1O94782 JTBP1-201ENST00000441314 247 ntBASIC1.89□□□□□ -2.11
USP1O94782 RNU6-971P-201ENST00000516920 106 ntBASIC1.89□□□□□ -2.11
USP1O94782 AC015712.3-201ENST00000559380 164 ntBASIC1.89□□□□□ -2.11
USP1O94782 MIR3646-201ENST00000578301 84 ntBASIC1.89□□□□□ -2.11
USP1O94782 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
USP1O94782 MIR4662B-201ENST00000579498 81 ntBASIC1.89□□□□□ -2.11
USP1O94782 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USP1O94782 RNU6-414P-201ENST00000363705 104 ntBASIC1.88□□□□□ -2.11
USP1O94782 RNU6-81P-201ENST00000365608 104 ntBASIC1.88□□□□□ -2.11
USP1O94782 SNORD61-201ENST00000384252 73 ntBASIC1.88□□□□□ -2.11
USP1O94782 CALM2P4-201ENST00000430810 426 ntBASIC1.88□□□□□ -2.11
USP1O94782 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
USP1O94782 RNU6-365P-201ENST00000517113 106 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms