Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SNORD115-34-201ENST00000362441 82 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 RNU6-444P-201ENST00000383988 108 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-0.81□□□□□ -2.54
USH2AO75445 RNU6-703P-201ENST00000516946 107 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 AL158211.4-201ENST00000606988 584 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 RNU6-697P-201ENST00000363348 107 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 RNU6-921P-201ENST00000384361 107 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 AC104850.1-201ENST00000435940 476 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 RNU7-14P-201ENST00000459331 62 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 AC022616.6-201ENST00000520479 119 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 AL138889.2-201ENST00000603883 242 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 RNU6-853P-201ENST00000364306 107 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 RNU4-55P-201ENST00000410731 137 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 U8.22-201ENST00000459141 133 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.81□□□□□ -2.54
USH2AO75445 AC087683.1-201ENST00000591187 441 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 RNY3P13-201ENST00000365542 102 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 SNORD19-201ENST00000391191 68 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 MTCO1P57-201ENST00000432182 261 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.81□□□□□ -2.54
USH2AO75445 AL158042.1-201ENST00000605338 460 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 AL133255.1-201ENST00000606374 441 ntBASIC-0.81□□□□□ -2.54
USH2AO75445 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 RNU6-142P-201ENST00000384019 107 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 MTCYBP2-201ENST00000407745 171 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.82□□□□□ -2.54
USH2AO75445 FABP5P15-201ENST00000453566 214 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AL358944.1-201ENST00000528537 144 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.82□□□□□ -2.54
USH2AO75445 AC055872.1-201ENST00000570978 278 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 SNORD115-45-201ENST00000391078 81 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 RNU4-22P-201ENST00000411058 166 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AC236972.2-201ENST00000434979 310 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
USH2AO75445 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AC093783.1-201ENST00000612976 329 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 SNORA1.2-201ENST00000365189 134 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 SNORD28B-201ENST00000390993 75 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.82□□□□□ -2.54
USH2AO75445 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.82□□□□□ -2.54
USH2AO75445 MIRLET7C-201ENST00000362160 84 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 SNORD115-14-201ENST00000363090 81 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AL008987.1-201ENST00000415528 237 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.82□□□□□ -2.54
USH2AO75445 AC090844.1-201ENST00000422019 156 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 Z98949.2-201ENST00000440996 144 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AL359672.1-201ENST00000442302 409 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.82□□□□□ -2.54
USH2AO75445 MIR4791-201ENST00000607666 84 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AC092608.3-201ENST00000625017 386 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 snoZ196.1-201ENST00000625269 89 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 RNU6-637P-201ENST00000384050 107 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.82□□□□□ -2.54
USH2AO75445 AC007547.1-201ENST00000462177 490 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AC005178.1-201ENST00000508392 440 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 RNU6-341P-201ENST00000516973 96 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.82□□□□□ -2.54
USH2AO75445 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 AC069503.3-201ENST00000618674 145 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 U6.73-201ENST00000619194 103 ntBASIC-0.82□□□□□ -2.54
USH2AO75445 RNU6-737P-201ENST00000365370 107 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 RNU6-878P-201ENST00000384578 110 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 AC104458.1-201ENST00000608243 463 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 MTND1P21-201ENST00000412991 285 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 AC093423.1-201ENST00000440817 142 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.83□□□□□ -2.54
USH2AO75445 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.83□□□□□ -2.54
USH2AO75445 AC010975.2-201ENST00000427781 588 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 RNU7-104P-201ENST00000459398 79 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 MIR3923-201ENST00000579521 83 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 AC022441.3-201ENST00000605737 136 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 MIR452-201ENST00000385020 85 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 RPL35AP4-201ENST00000412007 102 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 RNA5SP449-201ENST00000516871 130 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 AC023158.1-201ENST00000561632 1025 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 AP001282.2-201ENST00000616149 309 ntBASIC-0.83□□□□□ -2.54
USH2AO75445 RNU6-354P-201ENST00000383862 107 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 RNU6-610P-201ENST00000384264 107 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 MIR1253-201ENST00000408273 105 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 BX295541.1-201ENST00000417774 250 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 AC026414.1-201ENST00000504046 698 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 RNU6-861P-201ENST00000516745 106 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 RNU6-143P-201ENST00000516942 93 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 AP002795.1-201ENST00000534879 84 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 U4.1-201ENST00000620349 87 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms