Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 SNORA11-201ENST00000408789 128 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 AC092427.1-202ENST00000430569 476 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM13O60858 AC079600.2-201ENST00000550076 130 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 AC002984.1-201ENST00000591692 448 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 U4atac.1-201ENST00000618345 95 ntBASIC2.52□□□□□ -2.01
TRIM13O60858 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
TRIM13O60858 SNORA1B-201ENST00000362535 133 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 SNORD14E-201ENST00000364009 85 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 Y_RNA.360-201ENST00000365512 102 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 RNA5SP467-201ENST00000391274 118 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 RNU2-48P-201ENST00000410694 191 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 RNU7-80P-201ENST00000459562 61 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 AP003484.1-201ENST00000530974 250 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 AP002004.2-201ENST00000531656 154 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 MIR4778-201ENST00000577635 80 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 MIR4666B-201ENST00000578142 81 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 MIR5588-201ENST00000581890 63 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 MIR548Z-201ENST00000584743 97 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 MIR4762-201ENST00000585261 75 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 RPL12P50-201ENST00000603116 116 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 HSPE1P19-201ENST00000603327 295 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 MIR1255B1-201ENST00000636325 63 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.51□□□□□ -2.01
TRIM13O60858 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM13O60858 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM13O60858 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM13O60858 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM13O60858 RNU6-363P-201ENST00000362895 105 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 U8.5-201ENST00000364528 136 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 RNU4-16P-201ENST00000364737 141 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 Y_RNA.351-201ENST00000365436 96 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 Y_RNA.454-201ENST00000384224 113 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 RNU6-402P-201ENST00000410678 103 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 RNU6-733P-201ENST00000410759 104 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 BTF3P4-201ENST00000418852 495 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 AL049830.1-201ENST00000468034 425 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 RPS23P4-201ENST00000487908 423 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 RNU6-857P-201ENST00000515893 110 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 RNU6-991P-201ENST00000516168 107 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 SNORA18.7-201ENST00000516910 131 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 RNU6-667P-201ENST00000517186 102 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 MIR4325-201ENST00000583049 90 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 MIR92B-201ENST00000607575 96 ntBASIC2.5□□□□□ -2.01
TRIM13O60858 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM13O60858 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM13O60858 Y_RNA.155-201ENST00000363632 101 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 SNORA25B-201ENST00000365507 128 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 SNORA44-201ENST00000384584 132 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 MRPL35P3-201ENST00000421557 364 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 AL353813.1-201ENST00000440700 253 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 AC104389.3-201ENST00000445629 235 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 AC087499.4-201ENST00000448505 178 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 RNU7-171P-201ENST00000459581 62 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM13O60858 AC018868.1-201ENST00000491307 315 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 SNORA31.15-201ENST00000516771 132 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM13O60858 MIR4777-201ENST00000583710 86 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 AC078899.2-201ENST00000595282 212 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 Y_RNA.773-201ENST00000607168 90 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 AL353149.1-201ENST00000610667 244 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 MIR203B-201ENST00000636080 86 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 MIR338-201ENST00000636369 67 ntBASIC2.49□□□□□ -2.01
TRIM13O60858 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM13O60858 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM13O60858 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
TRIM13O60858 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM13O60858 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM13O60858 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
TRIM13O60858 RNU4-67P-201ENST00000364569 141 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 RNU6-219P-201ENST00000364728 107 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 RNU6-60P-201ENST00000364792 103 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 SNORD115-35-201ENST00000365122 82 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 RNU6-409P-201ENST00000384114 104 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 RNA5SP144-201ENST00000410846 116 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 SRIP3-201ENST00000413200 219 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 S100A11P2-201ENST00000467589 312 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM13O60858 MIR3944-201ENST00000581277 108 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 AC095038.3-201ENST00000634439 195 ntBASIC2.48□□□□□ -2.01
TRIM13O60858 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
TRIM13O60858 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
TRIM13O60858 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TRIM13O60858 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TRIM13O60858 Y_RNA.96-201ENST00000363092 109 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 SNORD68-201ENST00000363214 84 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 SNORD115-13-201ENST00000363358 82 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 SNORD115-16-201ENST00000363887 82 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 SNORD115-1-201ENST00000364961 82 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 snoU2-30.1-201ENST00000365012 70 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 Y_RNA.313-201ENST00000365095 103 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 SNORD116-22-201ENST00000384430 92 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 MIR605-201ENST00000385078 83 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 AL627390.1-201ENST00000396055 340 ntBASIC2.47□□□□□ -2.01
TRIM13O60858 SUMO1P4-201ENST00000429430 302 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms