Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 RNA5SP126-201ENST00000365092 109 ntBASIC2.07□□□□□ -2.08
KDM1AO60341 RNU6-203P-201ENST00000384038 104 ntBASIC2.07□□□□□ -2.08
KDM1AO60341 SNORD38C-201ENST00000384381 69 ntBASIC2.07□□□□□ -2.08
KDM1AO60341 MIR518F-201ENST00000384973 87 ntBASIC2.07□□□□□ -2.08
KDM1AO60341 MIR452-201ENST00000385020 85 ntBASIC2.07□□□□□ -2.08
KDM1AO60341 RNU6-346P-201ENST00000516288 111 ntBASIC2.07□□□□□ -2.08
KDM1AO60341 RNU7-25P-201ENST00000516544 62 ntBASIC2.07□□□□□ -2.08
KDM1AO60341 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.07□□□□□ -2.08
KDM1AO60341 MIR4778-201ENST00000577635 80 ntBASIC2.07□□□□□ -2.08
KDM1AO60341 MIR4648-201ENST00000580107 72 ntBASIC2.07□□□□□ -2.08
KDM1AO60341 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KDM1AO60341 AL442644.1-201ENST00000454390 3105 ntBASIC2.07□□□□□ -2.08
KDM1AO60341 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KDM1AO60341 Y_RNA.215-201ENST00000364204 112 ntBASIC2.06□□□□□ -2.08
KDM1AO60341 RNU6-818P-201ENST00000364837 108 ntBASIC2.06□□□□□ -2.08
KDM1AO60341 Y_RNA.542-201ENST00000384641 111 ntBASIC2.06□□□□□ -2.08
KDM1AO60341 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.06□□□□□ -2.08
KDM1AO60341 JTBP1-201ENST00000441314 247 ntBASIC2.06□□□□□ -2.08
KDM1AO60341 AC093850.1-201ENST00000454121 251 ntBASIC2.06□□□□□ -2.08
KDM1AO60341 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.06□□□□□ -2.08
KDM1AO60341 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.06□□□□□ -2.08
KDM1AO60341 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
KDM1AO60341 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
KDM1AO60341 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.06□□□□□ -2.08
KDM1AO60341 AC015726.2-201ENST00000620112 122 ntBASIC2.06□□□□□ -2.08
KDM1AO60341 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
KDM1AO60341 RNU6-187P-201ENST00000384139 106 ntBASIC2.05□□□□□ -2.08
KDM1AO60341 Y_RNA.488-201ENST00000384403 102 ntBASIC2.05□□□□□ -2.08
KDM1AO60341 MIR194-1-201ENST00000384892 85 ntBASIC2.05□□□□□ -2.08
KDM1AO60341 MIR513C-201ENST00000401352 84 ntBASIC2.05□□□□□ -2.08
KDM1AO60341 AL161935.2-201ENST00000414627 60 ntBASIC2.05□□□□□ -2.08
KDM1AO60341 RPL31P63-201ENST00000422565 375 ntBASIC2.05□□□□□ -2.08
KDM1AO60341 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.05□□□□□ -2.08
KDM1AO60341 AC090142.3-201ENST00000519012 385 ntBASIC2.05□□□□□ -2.08
KDM1AO60341 AC112693.2-201ENST00000556538 232 ntBASIC2.05□□□□□ -2.08
KDM1AO60341 MIR548X2-201ENST00000579776 100 ntBASIC2.05□□□□□ -2.08
KDM1AO60341 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
KDM1AO60341 RNU6-1082P-201ENST00000364574 107 ntBASIC2.04□□□□□ -2.08
KDM1AO60341 Y_RNA.547-201ENST00000384654 119 ntBASIC2.04□□□□□ -2.08
KDM1AO60341 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
KDM1AO60341 MIR1267-201ENST00000408723 78 ntBASIC2.04□□□□□ -2.08
KDM1AO60341 AC004965.1-201ENST00000413033 213 ntBASIC2.04□□□□□ -2.08
KDM1AO60341 AC015922.2-201ENST00000435593 184 ntBASIC2.04□□□□□ -2.08
KDM1AO60341 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
KDM1AO60341 AC095038.3-201ENST00000634439 195 ntBASIC2.04□□□□□ -2.08
KDM1AO60341 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KDM1AO60341 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KDM1AO60341 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KDM1AO60341 Y_RNA.343-201ENST00000365354 112 ntBASIC2.03□□□□□ -2.08
KDM1AO60341 RNU6-1336P-201ENST00000383886 109 ntBASIC2.03□□□□□ -2.08
KDM1AO60341 SNORA1-201ENST00000384107 130 ntBASIC2.03□□□□□ -2.08
KDM1AO60341 MIR569-201ENST00000385228 96 ntBASIC2.03□□□□□ -2.08
KDM1AO60341 RNU6-588P-201ENST00000410281 105 ntBASIC2.03□□□□□ -2.08
KDM1AO60341 RNA5SP127-201ENST00000411051 133 ntBASIC2.03□□□□□ -2.08
KDM1AO60341 RPL23AP42-201ENST00000471152 471 ntBASIC2.03□□□□□ -2.08
KDM1AO60341 RN7SL274P-201ENST00000492268 272 ntBASIC2.03□□□□□ -2.08
KDM1AO60341 MIR3129-201ENST00000581095 76 ntBASIC2.03□□□□□ -2.08
KDM1AO60341 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
KDM1AO60341 ZNF355P-201ENST00000427301 3216 ntBASIC2.02□□□□□ -2.09
KDM1AO60341 SNORD115-28-201ENST00000363931 81 ntBASIC2.02□□□□□ -2.09
KDM1AO60341 RNU6-1292P-201ENST00000383856 107 ntBASIC2.02□□□□□ -2.09
KDM1AO60341 MIR624-201ENST00000385217 97 ntBASIC2.02□□□□□ -2.09
KDM1AO60341 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
KDM1AO60341 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
KDM1AO60341 AL445646.1-201ENST00000431784 216 ntBASIC2.02□□□□□ -2.09
KDM1AO60341 AL392103.1-201ENST00000447000 198 ntBASIC2.02□□□□□ -2.09
KDM1AO60341 SNORA25.12-201ENST00000516202 82 ntBASIC2.02□□□□□ -2.09
KDM1AO60341 SNORA18.4-201ENST00000516440 124 ntBASIC2.02□□□□□ -2.09
KDM1AO60341 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
KDM1AO60341 ICE2P2-201ENST00000483823 2787 ntBASIC2.02□□□□□ -2.09
KDM1AO60341 MIR526A1-201ENST00000384897 85 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 MIR516B2-201ENST00000385190 85 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 AC019129.1-201ENST00000403786 261 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 RNU4-61P-201ENST00000411243 107 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 CYCSP49-201ENST00000420810 319 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KDM1AO60341 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 AC025033.1-201ENST00000463883 194 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 RNU6-830P-201ENST00000516353 107 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 IGKV3-31-201ENST00000523109 329 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 AC103810.8-201ENST00000607347 118 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 AC134878.1-201ENST00000619901 243 ntBASIC2.01□□□□□ -2.09
KDM1AO60341 SNORD50.2-201ENST00000365465 70 ntBASIC2□□□□□ -2.09
KDM1AO60341 MIR513A1-201ENST00000385138 129 ntBASIC2□□□□□ -2.09
KDM1AO60341 MIR136-201ENST00000385207 82 ntBASIC2□□□□□ -2.09
KDM1AO60341 MIR613-201ENST00000385248 95 ntBASIC2□□□□□ -2.09
KDM1AO60341 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2□□□□□ -2.09
KDM1AO60341 AF228730.3-201ENST00000436691 102 ntBASIC2□□□□□ -2.09
KDM1AO60341 RNU7-197P-201ENST00000458836 62 ntBASIC2□□□□□ -2.09
KDM1AO60341 RNU6-426P-201ENST00000516464 97 ntBASIC2□□□□□ -2.09
KDM1AO60341 SUMO2P16-201ENST00000519475 264 ntBASIC2□□□□□ -2.09
KDM1AO60341 DEFB122-202ENST00000569013 197 ntBASIC2□□□□□ -2.09
KDM1AO60341 Y_RNA.37-201ENST00000362606 108 ntBASIC1.99□□□□□ -2.09
KDM1AO60341 RNU6-457P-201ENST00000363999 107 ntBASIC1.99□□□□□ -2.09
KDM1AO60341 SNORA64-201ENST00000384674 134 ntBASIC1.99□□□□□ -2.09
KDM1AO60341 SNORD77.3-201ENST00000391113 65 ntBASIC1.99□□□□□ -2.09
KDM1AO60341 SNORA11.2-201ENST00000408318 127 ntBASIC1.99□□□□□ -2.09
KDM1AO60341 AC092991.1-201ENST00000477176 376 ntBASIC1.99□□□□□ -2.09
KDM1AO60341 RNU4-57P-201ENST00000515980 135 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms