Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SRGAP3O43295 MIR450A1-201ENST00000362262 91 ntBASIC2.54□□□□□ -2
SRGAP3O43295 Y_RNA.366-201ENST00000365540 102 ntBASIC2.54□□□□□ -2
SRGAP3O43295 AC245047.3-201ENST00000429428 127 ntBASIC2.54□□□□□ -2
SRGAP3O43295 CALM2P4-201ENST00000430810 426 ntBASIC2.54□□□□□ -2
SRGAP3O43295 RNU7-25P-201ENST00000516544 62 ntBASIC2.54□□□□□ -2
SRGAP3O43295 SCARNA15-202ENST00000516881 127 ntBASIC2.54□□□□□ -2
SRGAP3O43295 MIR5197-201ENST00000583721 112 ntBASIC2.54□□□□□ -2
SRGAP3O43295 uc_338.28-201ENST00000612082 187 ntBASIC2.54□□□□□ -2
SRGAP3O43295 AL137067.1-201ENST00000615933 120 ntBASIC2.54□□□□□ -2
SRGAP3O43295 U4atac.1-201ENST00000618345 95 ntBASIC2.54□□□□□ -2
SRGAP3O43295 MIR376A2-201ENST00000636782 80 ntBASIC2.54□□□□□ -2
SRGAP3O43295 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SRGAP3O43295 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.54□□□□□ -2
SRGAP3O43295 snoU2-30.1-201ENST00000365012 70 ntBASIC2.53□□□□□ -2
SRGAP3O43295 RNA5SP89-201ENST00000410300 108 ntBASIC2.53□□□□□ -2
SRGAP3O43295 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.53□□□□□ -2
SRGAP3O43295 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.53□□□□□ -2
SRGAP3O43295 RNU6-168P-201ENST00000516189 101 ntBASIC2.53□□□□□ -2
SRGAP3O43295 RNU6-113P-201ENST00000516653 101 ntBASIC2.53□□□□□ -2
SRGAP3O43295 MIR6715A-201ENST00000615929 79 ntBASIC2.53□□□□□ -2
SRGAP3O43295 Y_RNA.43-201ENST00000362670 111 ntBASIC2.52□□□□□ -2.01
SRGAP3O43295 Y_RNA.116-201ENST00000363292 103 ntBASIC2.52□□□□□ -2.01
SRGAP3O43295 Y_RNA.265-201ENST00000364677 108 ntBASIC2.52□□□□□ -2.01
SRGAP3O43295 AC099677.2-201ENST00000436385 175 ntBASIC2.52□□□□□ -2.01
SRGAP3O43295 AL606517.2-201ENST00000442855 241 ntBASIC2.52□□□□□ -2.01
SRGAP3O43295 RNU6-240P-201ENST00000516098 97 ntBASIC2.52□□□□□ -2.01
SRGAP3O43295 MIR3169-201ENST00000578032 83 ntBASIC2.52□□□□□ -2.01
SRGAP3O43295 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
SRGAP3O43295 AC134878.1-201ENST00000619901 243 ntBASIC2.52□□□□□ -2.01
SRGAP3O43295 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.52□□□□□ -2.01
SRGAP3O43295 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.52□□□□□ -2.01
SRGAP3O43295 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
SRGAP3O43295 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.51□□□□□ -2.01
SRGAP3O43295 RNA5SP160-201ENST00000364866 120 ntBASIC2.51□□□□□ -2.01
SRGAP3O43295 SNORA2.2-201ENST00000365473 135 ntBASIC2.51□□□□□ -2.01
SRGAP3O43295 RNU6-1189P-201ENST00000383958 107 ntBASIC2.51□□□□□ -2.01
SRGAP3O43295 MIR627-201ENST00000384979 97 ntBASIC2.51□□□□□ -2.01
SRGAP3O43295 RNA5SP109-201ENST00000391010 116 ntBASIC2.51□□□□□ -2.01
SRGAP3O43295 AL031737.1-201ENST00000450125 223 ntBASIC2.51□□□□□ -2.01
SRGAP3O43295 AC026271.5-201ENST00000577873 130 ntBASIC2.51□□□□□ -2.01
SRGAP3O43295 MIR6895-201ENST00000613497 78 ntBASIC2.51□□□□□ -2.01
SRGAP3O43295 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SRGAP3O43295 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SRGAP3O43295 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SRGAP3O43295 SNORD115-28-201ENST00000363931 81 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 U8.5-201ENST00000364528 136 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 Y_RNA.410-201ENST00000383992 113 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 MIR570-201ENST00000384917 97 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 RNA5SP136-201ENST00000410906 107 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.5□□□□□ -2.01
SRGAP3O43295 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.5□□□□□ -2.01
SRGAP3O43295 RNU6-412P-201ENST00000516434 106 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 SNORD45.4-201ENST00000516629 73 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 RNU7-70P-201ENST00000516941 66 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 MIR4762-201ENST00000585261 75 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 AC104984.5-201ENST00000586878 94 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 AC006441.5-201ENST00000612680 209 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 AL449363.1-201ENST00000617815 186 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 AC015726.2-201ENST00000620112 122 ntBASIC2.5□□□□□ -2.01
SRGAP3O43295 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.5□□□□□ -2.01
SRGAP3O43295 SNORD114-1-201ENST00000362705 72 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 RNU6-1255P-201ENST00000363434 112 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 RNU6-268P-201ENST00000364174 107 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 RNU6-690P-201ENST00000365242 106 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 RNA5SP482-201ENST00000391269 118 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 STAG3L5P-204ENST00000443759 179 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 AC025033.1-201ENST00000463883 194 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 AC121758.2-201ENST00000553271 193 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 AC007012.1-201ENST00000567192 175 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 MIR5089-201ENST00000580047 84 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 SNRPGP19-201ENST00000603826 189 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 AC022202.1-201ENST00000613515 211 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.49□□□□□ -2.01
SRGAP3O43295 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
SRGAP3O43295 Y_RNA.37-201ENST00000362606 108 ntBASIC2.48□□□□□ -2.01
SRGAP3O43295 Y_RNA.309-201ENST00000365046 111 ntBASIC2.48□□□□□ -2.01
SRGAP3O43295 Y_RNA.547-201ENST00000384654 119 ntBASIC2.48□□□□□ -2.01
SRGAP3O43295 AC079804.2-201ENST00000490376 200 ntBASIC2.48□□□□□ -2.01
SRGAP3O43295 COX6CP6-201ENST00000490840 228 ntBASIC2.48□□□□□ -2.01
SRGAP3O43295 SNORD36C-201ENST00000516733 66 ntBASIC2.48□□□□□ -2.01
SRGAP3O43295 AP000553.5-201ENST00000641933 54 ntBASIC2.48□□□□□ -2.01
SRGAP3O43295 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SRGAP3O43295 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.48□□□□□ -2.01
SRGAP3O43295 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SRGAP3O43295 RNA5SP37-201ENST00000365420 130 ntBASIC2.47□□□□□ -2.01
SRGAP3O43295 RNU6-32P-201ENST00000383948 107 ntBASIC2.47□□□□□ -2.01
SRGAP3O43295 RNU6-13P-201ENST00000384248 107 ntBASIC2.47□□□□□ -2.01
SRGAP3O43295 Y_RNA.495-201ENST00000384435 112 ntBASIC2.47□□□□□ -2.01
SRGAP3O43295 RNU6-12P-201ENST00000384604 107 ntBASIC2.47□□□□□ -2.01
SRGAP3O43295 RNU6-41P-201ENST00000384741 107 ntBASIC2.47□□□□□ -2.01
SRGAP3O43295 SNORD12C-201ENST00000386307 89 ntBASIC2.47□□□□□ -2.01
SRGAP3O43295 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.47□□□□□ -2.01
SRGAP3O43295 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.47□□□□□ -2.01
SRGAP3O43295 UBL5P3-201ENST00000475112 231 ntBASIC2.47□□□□□ -2.01
SRGAP3O43295 AC090255.1-201ENST00000495779 349 ntBASIC2.47□□□□□ -2.01
SRGAP3O43295 SNORA18.7-201ENST00000516910 131 ntBASIC2.47□□□□□ -2.01
SRGAP3O43295 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.47□□□□□ -2.01
SRGAP3O43295 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SRGAP3O43295 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms