Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM38O00635 RNA5SP276-201ENST00000362580 94 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 RNU4-52P-201ENST00000384209 138 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 RNU11-5P-201ENST00000391216 129 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 RNA5SP496-201ENST00000391240 109 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 RNA5SP100-201ENST00000410903 110 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 RNA5SP59-201ENST00000410922 110 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 AL603825.1-201ENST00000438481 80 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 RPL36AP21-201ENST00000490372 323 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 Y_RNA.690-201ENST00000516603 95 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 Y_RNA.694-201ENST00000516677 117 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 AL160236.1-201ENST00000556317 195 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 AC091178.2-201ENST00000584401 117 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 uc_338.28-201ENST00000612082 187 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.13□□□□□ -2.07
TRIM38O00635 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM38O00635 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
TRIM38O00635 MIR548A1-201ENST00000385041 97 ntBASIC2.12□□□□□ -2.07
TRIM38O00635 AL603914.1-201ENST00000401964 204 ntBASIC2.12□□□□□ -2.07
TRIM38O00635 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM38O00635 HMGN2P23-201ENST00000456759 269 ntBASIC2.12□□□□□ -2.07
TRIM38O00635 RPL23AP42-201ENST00000471152 471 ntBASIC2.12□□□□□ -2.07
TRIM38O00635 RNA5SP200-201ENST00000516360 103 ntBASIC2.12□□□□□ -2.07
TRIM38O00635 RNU7-116P-201ENST00000516940 62 ntBASIC2.12□□□□□ -2.07
TRIM38O00635 IGKV1-22-201ENST00000524313 326 ntBASIC2.12□□□□□ -2.07
TRIM38O00635 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM38O00635 AC022254.1-201ENST00000567857 235 ntBASIC2.12□□□□□ -2.07
TRIM38O00635 MIR4299-201ENST00000577899 72 ntBASIC2.12□□□□□ -2.07
TRIM38O00635 MIR4438-201ENST00000585271 93 ntBASIC2.12□□□□□ -2.07
TRIM38O00635 AL929325.1-201ENST00000603096 117 ntBASIC2.12□□□□□ -2.07
TRIM38O00635 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM38O00635 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.11□□□□□ -2.07
TRIM38O00635 Y_RNA.116-201ENST00000363292 103 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNU6-112P-201ENST00000363599 104 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 SNORA63D-201ENST00000364359 132 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNU6-117P-201ENST00000365415 107 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNU6-32P-201ENST00000383948 107 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNU6-13P-201ENST00000384248 107 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 SNORA72-201ENST00000384339 132 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNU6-12P-201ENST00000384604 107 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNU6-41P-201ENST00000384741 107 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 MIR520A-201ENST00000384862 85 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNA5SP323-201ENST00000391094 133 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNA5SP511-201ENST00000410487 115 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNU2-55P-201ENST00000411146 174 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RPL23AP6-201ENST00000446637 472 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM38O00635 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RPS27P21-201ENST00000486977 252 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNA5SP20-201ENST00000515976 84 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RN7SKP19-201ENST00000516016 252 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 SNORD77.4-201ENST00000516158 81 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNU6-1299P-201ENST00000516316 100 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 SCARNA16.3-201ENST00000516595 184 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNU1-142P-201ENST00000516682 145 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 RNU6-548P-201ENST00000517083 115 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.11□□□□□ -2.07
TRIM38O00635 AC015720.1-201ENST00000565251 277 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 AC097639.2-201ENST00000603159 172 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 AL627230.6-201ENST00000611129 280 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 AC009831.4-201ENST00000620744 325 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 AL121890.5-201ENST00000620848 304 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.11□□□□□ -2.07
TRIM38O00635 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.1□□□□□ -2.07
TRIM38O00635 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TRIM38O00635 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRIM38O00635 Y_RNA.52-201ENST00000362760 96 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 RNU6-647P-201ENST00000364243 107 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 Y_RNA.634-201ENST00000364811 113 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 Y_RNA.369-201ENST00000365568 117 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 RNU6-880P-201ENST00000384526 107 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TRIM38O00635 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 Y_RNA.649-201ENST00000459077 103 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 RPS27P22-201ENST00000478056 241 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 AC097462.1-201ENST00000514125 324 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 RNU7-99P-201ENST00000516271 62 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 RNU6-844P-201ENST00000517175 102 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 MIR4713-201ENST00000582691 75 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 AL353997.5-201ENST00000618886 171 ntBASIC2.1□□□□□ -2.07
TRIM38O00635 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRIM38O00635 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRIM38O00635 AC131280.1-202ENST00000624067 4211 ntBASIC2.09□□□□□ -2.07
TRIM38O00635 RNU6-1080P-201ENST00000383982 107 ntBASIC2.09□□□□□ -2.07
TRIM38O00635 RNU6-106P-201ENST00000384405 107 ntBASIC2.09□□□□□ -2.07
TRIM38O00635 RNU6-296P-201ENST00000384608 107 ntBASIC2.09□□□□□ -2.07
TRIM38O00635 RNU6-136P-201ENST00000384663 107 ntBASIC2.09□□□□□ -2.07
TRIM38O00635 RNA5SP467-201ENST00000391274 118 ntBASIC2.09□□□□□ -2.07
TRIM38O00635 RNY4P30-201ENST00000410216 95 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms