Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Y_RNA.176-201ENST00000363815 109 ntBASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.293-201ENST00000364908 93 ntBASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.363-201ENST00000365529 113 ntBASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-514P-201ENST00000384208 107 ntBASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 SNORA53-201ENST00000391141 249 ntBASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 RNU11-5P-201ENST00000391216 129 ntBASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-561P-201ENST00000516222 102 ntBASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.14-201ENST00000362415 103 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.149-201ENST00000363558 117 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.307-201ENST00000365022 117 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.416-201ENST00000384014 113 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 MIR562-201ENST00000384894 95 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 MIR499A-201ENST00000384903 122 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-1228P-201ENST00000391014 107 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 SNORD2.1-201ENST00000458762 69 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 AC048334.1-201ENST00000477975 159 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 CYCTP-201ENST00000504253 315 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 RNU7-41P-201ENST00000515917 61 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-947P-201ENST00000516264 106 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 AC100767.1-201ENST00000528178 123 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 AL358944.1-201ENST00000528537 144 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 MIR3664-201ENST00000579074 99 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 MIR3128-201ENST00000581957 66 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 SNORA28-201ENST00000606769 126 ntBASIC0.94□□□□□ -2.26
TRIM49D1C9J1S8 MIR96-201ENST00000362288 78 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.122-201ENST00000363331 96 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-899P-201ENST00000363947 107 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.269-201ENST00000364685 89 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-131P-201ENST00000391144 107 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 MIR891A-201ENST00000401237 79 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 MIR1287-201ENST00000408492 90 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 AC024067.1-201ENST00000426199 223 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 FTH1P12-201ENST00000432137 551 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 MTND4LP30-201ENST00000454092 297 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-1132P-201ENST00000459214 107 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-1143P-201ENST00000516125 104 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 AC008507.4-201ENST00000585464 127 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 HSPE1P19-201ENST00000603327 295 ntBASIC0.93□□□□□ -2.26
TRIM49D1C9J1S8 AL442644.1-201ENST00000454390 3105 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-653P-201ENST00000363074 106 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 SNORA25.3-201ENST00000363205 127 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.229-201ENST00000364347 113 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.336-201ENST00000365307 109 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.494-201ENST00000384432 111 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-950P-201ENST00000384651 107 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.562-201ENST00000384695 113 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 MIR653-201ENST00000385279 96 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 RPL39P38-201ENST00000467018 153 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 SNORA18.7-201ENST00000516910 131 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 RNU7-116P-201ENST00000516940 62 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 AC007751.1-201ENST00000529260 376 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 MIR6504-201ENST00000613520 61 ntBASIC0.92□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-1084P-201ENST00000362498 107 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.91-201ENST00000363042 107 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-833P-201ENST00000363486 107 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 SNORD114-27-201ENST00000363766 70 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-674P-201ENST00000363831 107 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-268P-201ENST00000364174 107 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 RNU6-923P-201ENST00000364753 107 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 Y_RNA.666-201ENST00000516187 112 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 SNORD111.1-201ENST00000516421 86 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 RNU7-25P-201ENST00000516544 62 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 RNU7-28P-201ENST00000516759 62 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 RN7SKP88-201ENST00000516847 250 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 RNU7-181P-201ENST00000517234 74 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 AC090049.2-201ENST00000550377 109 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 AL162730.1-201ENST00000605734 292 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 7SK.8-201ENST00000612110 250 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 JPX_2.1-201ENST00000614161 69 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 7SK.11-201ENST00000615477 250 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 AL365265.1-201ENST00000621045 234 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 7SK.13-201ENST00000622040 250 ntBASIC0.91□□□□□ -2.26
TRIM49D1C9J1S8 MIR335-201ENST00000362173 94 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 Y_RNA.65-201ENST00000362846 100 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 Y_RNA.144-201ENST00000363521 113 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 Y_RNA.447-201ENST00000384184 113 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 RNU6-493P-201ENST00000391321 108 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 Y_RNA.590-201ENST00000410140 107 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 Y_RNA.622-201ENST00000411091 108 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 SNX2P2-201ENST00000424553 323 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 SNORA31.2-201ENST00000516019 134 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 RN7SKP164-201ENST00000516138 266 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 RNU7-149P-201ENST00000516739 59 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 RNU6-111P-201ENST00000517179 105 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 AL162424.1-201ENST00000602325 221 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 AC015726.2-201ENST00000620112 122 ntBASIC0.9□□□□□ -2.27
TRIM49D1C9J1S8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms