Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SNORD38.1-201ENST00000363863 68 ntBASIC3.46□□□□□ -1.86
RCCD1A6NED2 RNU6-652P-201ENST00000365488 107 ntBASIC3.46□□□□□ -1.86
RCCD1A6NED2 RNU6-1190P-201ENST00000410811 104 ntBASIC3.46□□□□□ -1.86
RCCD1A6NED2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.46□□□□□ -1.86
RCCD1A6NED2 MIR5094-201ENST00000578766 85 ntBASIC3.46□□□□□ -1.86
RCCD1A6NED2 MIR3922-201ENST00000585192 84 ntBASIC3.46□□□□□ -1.86
RCCD1A6NED2 MIR8058-201ENST00000615737 89 ntBASIC3.46□□□□□ -1.86
RCCD1A6NED2 AC243994.1-201ENST00000618627 109 ntBASIC3.46□□□□□ -1.86
RCCD1A6NED2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.46□□□□□ -1.86
RCCD1A6NED2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RCCD1A6NED2 RNU6-633P-201ENST00000362612 103 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 Y_RNA.140-201ENST00000363474 103 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 Y_RNA.191-201ENST00000363972 113 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 RNU6-776P-201ENST00000364403 104 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 Y_RNA.247-201ENST00000364500 92 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 RNU6-1022P-201ENST00000365049 104 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 RPS29P4-201ENST00000414733 161 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 AC017083.1-201ENST00000428093 483 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 RPS12P2-201ENST00000439728 269 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.45□□□□□ -1.86
RCCD1A6NED2 snoU13.22-201ENST00000459428 104 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 UBL5P1-201ENST00000507979 193 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.45□□□□□ -1.86
RCCD1A6NED2 MIR3944-201ENST00000581277 108 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 MIR7851-201ENST00000610611 160 ntBASIC3.45□□□□□ -1.86
RCCD1A6NED2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.45□□□□□ -1.86
RCCD1A6NED2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.45□□□□□ -1.86
RCCD1A6NED2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RCCD1A6NED2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RCCD1A6NED2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RCCD1A6NED2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RCCD1A6NED2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.44□□□□□ -1.86
RCCD1A6NED2 RNU6-1163P-201ENST00000364516 107 ntBASIC3.44□□□□□ -1.86
RCCD1A6NED2 RNU6-913P-201ENST00000390913 95 ntBASIC3.44□□□□□ -1.86
RCCD1A6NED2 AL445685.2-201ENST00000422551 342 ntBASIC3.44□□□□□ -1.86
RCCD1A6NED2 RNU6-1006P-201ENST00000516998 103 ntBASIC3.44□□□□□ -1.86
RCCD1A6NED2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
RCCD1A6NED2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RCCD1A6NED2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RCCD1A6NED2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
RCCD1A6NED2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
RCCD1A6NED2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.43□□□□□ -1.86
RCCD1A6NED2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RCCD1A6NED2 RNU6-1067P-201ENST00000384752 107 ntBASIC3.43□□□□□ -1.86
RCCD1A6NED2 SNORA46-201ENST00000384762 135 ntBASIC3.43□□□□□ -1.86
RCCD1A6NED2 RNU6-1031P-201ENST00000384773 107 ntBASIC3.43□□□□□ -1.86
RCCD1A6NED2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.43□□□□□ -1.86
RCCD1A6NED2 AC091153.1-201ENST00000466297 402 ntBASIC3.43□□□□□ -1.86
RCCD1A6NED2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.43□□□□□ -1.86
RCCD1A6NED2 MIR2682-201ENST00000580305 110 ntBASIC3.43□□□□□ -1.86
RCCD1A6NED2 AC019176.2-201ENST00000611579 315 ntBASIC3.43□□□□□ -1.86
RCCD1A6NED2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.43□□□□□ -1.86
RCCD1A6NED2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RCCD1A6NED2 MIR218-2-201ENST00000385006 110 ntBASIC3.42□□□□□ -1.86
RCCD1A6NED2 MIR548AR-201ENST00000582191 57 ntBASIC3.42□□□□□ -1.86
RCCD1A6NED2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RCCD1A6NED2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RCCD1A6NED2 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.41□□□□□ -1.86
RCCD1A6NED2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RCCD1A6NED2 MIR206-201ENST00000384872 86 ntBASIC3.41□□□□□ -1.86
RCCD1A6NED2 Y_RNA.609-201ENST00000410669 89 ntBASIC3.41□□□□□ -1.86
RCCD1A6NED2 RPS29P28-201ENST00000446439 141 ntBASIC3.41□□□□□ -1.86
RCCD1A6NED2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.41□□□□□ -1.86
RCCD1A6NED2 MIR5047-201ENST00000579212 100 ntBASIC3.41□□□□□ -1.86
RCCD1A6NED2 AC012314.7-201ENST00000619693 93 ntBASIC3.41□□□□□ -1.86
RCCD1A6NED2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.41□□□□□ -1.86
RCCD1A6NED2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RCCD1A6NED2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.4□□□□□ -1.87
RCCD1A6NED2 SNORD123-201ENST00000459473 70 ntBASIC3.4□□□□□ -1.87
RCCD1A6NED2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
RCCD1A6NED2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.4□□□□□ -1.87
RCCD1A6NED2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RCCD1A6NED2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RCCD1A6NED2 SNORA63.1-201ENST00000362493 131 ntBASIC3.39□□□□□ -1.87
RCCD1A6NED2 RNU1-109P-201ENST00000383960 147 ntBASIC3.39□□□□□ -1.87
RCCD1A6NED2 Y_RNA.537-201ENST00000384626 109 ntBASIC3.39□□□□□ -1.87
RCCD1A6NED2 MIR490-201ENST00000384865 128 ntBASIC3.39□□□□□ -1.87
RCCD1A6NED2 SNORD28B-201ENST00000390993 75 ntBASIC3.39□□□□□ -1.87
RCCD1A6NED2 BX510359.4-201ENST00000423750 193 ntBASIC3.39□□□□□ -1.87
RCCD1A6NED2 AC093850.1-201ENST00000454121 251 ntBASIC3.39□□□□□ -1.87
RCCD1A6NED2 RNU6-826P-201ENST00000516827 104 ntBASIC3.39□□□□□ -1.87
RCCD1A6NED2 RNA5SP380-201ENST00000517190 98 ntBASIC3.39□□□□□ -1.87
RCCD1A6NED2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.39□□□□□ -1.87
RCCD1A6NED2 AC093908.1-201ENST00000623125 8092 ntBASIC3.39□□□□□ -1.87
RCCD1A6NED2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.39□□□□□ -1.87
RCCD1A6NED2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.38□□□□□ -1.87
RCCD1A6NED2 AP000648.3-201ENST00000623539 4507 ntBASIC3.38□□□□□ -1.87
RCCD1A6NED2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RCCD1A6NED2 SNORD46.1-201ENST00000364139 104 ntBASIC3.38□□□□□ -1.87
RCCD1A6NED2 AC245047.7-201ENST00000440265 293 ntBASIC3.38□□□□□ -1.87
RCCD1A6NED2 UQCRHP3-201ENST00000451503 251 ntBASIC3.38□□□□□ -1.87
RCCD1A6NED2 PRSS3P4-201ENST00000453323 162 ntBASIC3.38□□□□□ -1.87
RCCD1A6NED2 RNU7-35P-201ENST00000517174 62 ntBASIC3.38□□□□□ -1.87
RCCD1A6NED2 MIR4276-201ENST00000584832 70 ntBASIC3.38□□□□□ -1.87
RCCD1A6NED2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RCCD1A6NED2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RCCD1A6NED2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RCCD1A6NED2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.37□□□□□ -1.87
RCCD1A6NED2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms