Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU7-53P-201ENST00000516705 60 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORA25.16-201ENST00000516741 121 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 MIR4280-201ENST00000582178 76 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 AC073648.5-201ENST00000603502 305 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 MIR7844-201ENST00000616161 122 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 RNA5SP403-201ENST00000363598 108 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 CYCSP46-201ENST00000423569 204 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 AC084290.1-201ENST00000434995 374 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-625P-201ENST00000459412 107 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU7-188P-201ENST00000517063 64 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 MIR378F-201ENST00000578143 78 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 AL158211.2-201ENST00000607282 395 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 JPX_2.1-201ENST00000614161 69 ntBASIC-1.16□□□□□ -2.6
TRAV1-2A0A0B4J238 RNY1P16-201ENST00000363063 111 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-181P-201ENST00000363225 107 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 MIR587-201ENST00000384845 96 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-192P-201ENST00000391253 100 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 AL031003.1-201ENST00000404229 172 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 USP9YP16-201ENST00000430287 407 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 AC073415.1-201ENST00000449240 153 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 USP9YP23-201ENST00000455085 407 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 RNA5SP484-201ENST00000458857 111 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU7-25P-201ENST00000516544 62 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-445P-201ENST00000516949 107 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 MIR4499-201ENST00000584834 69 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 AC245014.2-201ENST00000603689 287 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 AC092747.3-201ENST00000603769 301 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 AC011373.1-201ENST00000607270 237 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 AP000240.1-201ENST00000609910 452 ntBASIC-1.17□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-790P-201ENST00000384479 105 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 SNORA40.5-201ENST00000391061 128 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 SNORD57-201ENST00000448188 72 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 CHEK2P4-201ENST00000450340 246 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU7-104P-201ENST00000459398 79 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 MIR4423-201ENST00000580922 80 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 AC124312.5-201ENST00000604451 268 ntBASIC-1.18□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-509P-201ENST00000363519 107 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 SNORD114-25-201ENST00000363742 72 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-702P-201ENST00000364982 107 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 SNORD56B-201ENST00000384713 71 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-175P-201ENST00000516896 107 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 AL118558.2-201ENST00000556294 238 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 MIR5188-201ENST00000583467 113 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 AL356055.1-201ENST00000602528 446 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 uc_338.19-201ENST00000616808 99 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 MIR6851-201ENST00000617060 67 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 AC073534.2-201ENST00000620377 381 ntBASIC-1.19□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-996P-201ENST00000365438 107 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 AL606923.1-201ENST00000406616 190 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 RNA5SP237-201ENST00000410414 113 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 USMG5P1-201ENST00000425964 177 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 AL445193.1-201ENST00000441183 141 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 SNORA13-201ENST00000458790 133 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-274P-201ENST00000459566 107 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 SNORA19.2-201ENST00000516013 114 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.2□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-24P-201ENST00000384440 107 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-721P-201ENST00000410155 105 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-938P-201ENST00000411285 103 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 RPS29P24-201ENST00000486345 171 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 SNORA40.9-201ENST00000515895 93 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 RNY1P9-201ENST00000532431 109 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 AC141846.1-201ENST00000568348 142 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms