Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 ATP5J2P3-201ENST00000451550 258 ntBASIC2.74□□□□□ -1.97
PCDHA11Q9Y5I1 AC024995.1-201ENST00000523014 93 ntBASIC2.74□□□□□ -1.97
PCDHA11Q9Y5I1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PCDHA11Q9Y5I1 SNORA8-201ENST00000384574 139 ntBASIC2.73□□□□□ -1.97
PCDHA11Q9Y5I1 RNU6-160P-201ENST00000384591 107 ntBASIC2.73□□□□□ -1.97
PCDHA11Q9Y5I1 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.73□□□□□ -1.97
PCDHA11Q9Y5I1 RNA5SP136-201ENST00000410906 107 ntBASIC2.73□□□□□ -1.97
PCDHA11Q9Y5I1 AL049830.1-201ENST00000468034 425 ntBASIC2.73□□□□□ -1.97
PCDHA11Q9Y5I1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.73□□□□□ -1.97
PCDHA11Q9Y5I1 MIR5197-201ENST00000583721 112 ntBASIC2.73□□□□□ -1.97
PCDHA11Q9Y5I1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.73□□□□□ -1.97
PCDHA11Q9Y5I1 SNORA38-201ENST00000363946 132 ntBASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 RNA5SP99-201ENST00000364020 114 ntBASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 Y_RNA.528-201ENST00000384575 108 ntBASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 RNU6-443P-201ENST00000384780 107 ntBASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 AL359511.1-201ENST00000402970 211 ntBASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 CST2P1-201ENST00000425770 87 ntBASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 CALM2P4-201ENST00000430810 426 ntBASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 AC022217.4-201ENST00000604389 163 ntBASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 MIR376A2-201ENST00000636782 80 ntBASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHA11Q9Y5I1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 Y_RNA.116-201ENST00000363292 103 ntBASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 Y_RNA.281-201ENST00000364774 94 ntBASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 MIR570-201ENST00000384917 97 ntBASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 AL031737.1-201ENST00000450125 223 ntBASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 AC234781.5-201ENST00000508429 271 ntBASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6-412P-201ENST00000516434 106 ntBASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 MIR4762-201ENST00000585261 75 ntBASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 uc_338.28-201ENST00000612082 187 ntBASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDHA11Q9Y5I1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 U8.5-201ENST00000364528 136 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 Y_RNA.366-201ENST00000365540 102 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6-32P-201ENST00000383948 107 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6-13P-201ENST00000384248 107 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6-12P-201ENST00000384604 107 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6-41P-201ENST00000384741 107 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 MIR802-201ENST00000390235 94 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 MIR1262-201ENST00000408276 93 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 MIR548O-201ENST00000408583 114 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 RNA5SP247-201ENST00000411181 105 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 RPS12P2-201ENST00000439728 269 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 AL163195.1-201ENST00000496941 348 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 AC026271.5-201ENST00000577873 130 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 AC006441.5-201ENST00000612680 209 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 AL137067.1-201ENST00000615933 120 ntBASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PCDHA11Q9Y5I1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 MIR450A1-201ENST00000362262 91 ntBASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 Y_RNA.410-201ENST00000383992 113 ntBASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 Y_RNA.495-201ENST00000384435 112 ntBASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 COX6CP6-201ENST00000490840 228 ntBASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 Y_RNA.694-201ENST00000516677 117 ntBASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6-826P-201ENST00000516827 104 ntBASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 AC007012.1-201ENST00000567192 175 ntBASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 AL353997.5-201ENST00000618886 171 ntBASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 AC134878.1-201ENST00000619901 243 ntBASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHA11Q9Y5I1 SNORD68-201ENST00000363214 84 ntBASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 SNORD14E-201ENST00000364009 85 ntBASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6-442P-201ENST00000383968 104 ntBASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6-106P-201ENST00000384405 107 ntBASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 RNA5SP210-201ENST00000391034 120 ntBASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 RPS26P48-201ENST00000491713 339 ntBASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 RNA5SP458-201ENST00000516188 119 ntBASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 MIR4679-1-201ENST00000637619 75 ntBASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6-862P-201ENST00000362804 105 ntBASIC2.67□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6-1107P-201ENST00000364817 104 ntBASIC2.67□□□□□ -1.98
PCDHA11Q9Y5I1 RNU1-148P-201ENST00000384472 162 ntBASIC2.67□□□□□ -1.98
PCDHA11Q9Y5I1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHA11Q9Y5I1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 Y_RNA.85-201ENST00000363014 111 ntBASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 RNA5SP493-201ENST00000364115 91 ntBASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 RNU6-1189P-201ENST00000383958 107 ntBASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 SNORD12C-201ENST00000386307 89 ntBASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 SNRPGP14-201ENST00000435400 219 ntBASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 RPS29P24-201ENST00000486345 171 ntBASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 RNA5SP281-201ENST00000516504 135 ntBASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 RNU7-25P-201ENST00000516544 62 ntBASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 AC004486.1-201ENST00000546846 233 ntBASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.66□□□□□ -1.98
PCDHA11Q9Y5I1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms