Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.15□□□□□ -2.07
PCDHB1Q9Y5F3 AL034345.1-201ENST00000407768 123 ntBASIC2.15□□□□□ -2.07
PCDHB1Q9Y5F3 SNRPGP10-201ENST00000432323 225 ntBASIC2.15□□□□□ -2.07
PCDHB1Q9Y5F3 RPL23AP42-201ENST00000471152 471 ntBASIC2.15□□□□□ -2.07
PCDHB1Q9Y5F3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.15□□□□□ -2.07
PCDHB1Q9Y5F3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.15□□□□□ -2.07
PCDHB1Q9Y5F3 MIR126-201ENST00000362291 85 ntBASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-460P-201ENST00000391158 108 ntBASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 RNU2-55P-201ENST00000411146 174 ntBASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 RNU7-197P-201ENST00000458836 62 ntBASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 RNA5SP57-201ENST00000459463 123 ntBASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 RPL23AP63-201ENST00000498752 471 ntBASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 AC087685.1-201ENST00000587507 141 ntBASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 AL365222.1-201ENST00000614661 98 ntBASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 AL591926.4-201ENST00000616895 298 ntBASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCDHB1Q9Y5F3 AC010332.2-201ENST00000613083 1904 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 Y_RNA.337-201ENST00000365312 102 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-959P-201ENST00000384671 107 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-588P-201ENST00000410281 105 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 RPL30P13-201ENST00000418873 348 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 MTND4LP9-201ENST00000427694 174 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 FTH1P12-201ENST00000432137 551 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-126P-201ENST00000516685 103 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-971P-201ENST00000516920 106 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 RNA5SP437-201ENST00000517249 129 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 AC112693.2-201ENST00000556538 232 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 AC120024.3-201ENST00000603167 156 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 uc_338.4-201ENST00000616635 176 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHB1Q9Y5F3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-1082P-201ENST00000364574 107 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-484P-201ENST00000384016 107 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 Y_RNA.420-201ENST00000384043 110 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 Y_RNA.542-201ENST00000384641 111 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-360P-201ENST00000390944 104 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 SNORD37.2-201ENST00000391075 66 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 STAG3L5P-204ENST00000443759 179 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 SNORD11-201ENST00000459124 84 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 AC092991.1-201ENST00000477176 376 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 SNORA31.10-201ENST00000516482 106 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 MIR4762-201ENST00000585261 75 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 MIR219B-201ENST00000637023 88 ntBASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHB1Q9Y5F3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 RNA5SP276-201ENST00000362580 94 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-199P-201ENST00000362954 107 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 Y_RNA.91-201ENST00000363042 107 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 SNORD68-201ENST00000363214 84 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 U8.5-201ENST00000364528 136 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-22P-201ENST00000384355 107 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 MIR522-201ENST00000385071 87 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 RNU4-43P-201ENST00000410628 137 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 MLLT10P1-201ENST00000418346 262 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 HSPE1P9-201ENST00000440046 311 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 snoU13.27-201ENST00000459278 104 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-295P-201ENST00000516901 104 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 MIR4709-201ENST00000577272 72 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 AL773524.1-201ENST00000614065 229 ntBASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDHB1Q9Y5F3 Y_RNA.218-201ENST00000364218 104 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 Y_RNA.261-201ENST00000364631 102 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 SNORA16B-201ENST00000364674 135 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 SNORA22C-201ENST00000384614 134 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 MIR513C-201ENST00000401352 84 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 RNA5SP247-201ENST00000411181 105 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 OR9P1P-201ENST00000496431 281 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 SNORA31.17-201ENST00000516953 127 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 MIR4287-201ENST00000579398 78 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 MIR4662B-201ENST00000579498 81 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 MIR5002-201ENST00000584713 97 ntBASIC2.1□□□□□ -2.07
PCDHB1Q9Y5F3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.09□□□□□ -2.07
PCDHB1Q9Y5F3 SNORA4.2-201ENST00000365313 147 ntBASIC2.09□□□□□ -2.07
PCDHB1Q9Y5F3 Y_RNA.338-201ENST00000365320 114 ntBASIC2.09□□□□□ -2.07
PCDHB1Q9Y5F3 Y_RNA.393-201ENST00000383936 102 ntBASIC2.09□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-1117P-201ENST00000384525 104 ntBASIC2.09□□□□□ -2.07
PCDHB1Q9Y5F3 AC244636.1-201ENST00000421152 228 ntBASIC2.09□□□□□ -2.07
PCDHB1Q9Y5F3 RPL23AP6-201ENST00000446637 472 ntBASIC2.09□□□□□ -2.07
PCDHB1Q9Y5F3 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
PCDHB1Q9Y5F3 NDUFA4P2-201ENST00000489989 244 ntBASIC2.09□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-1234P-201ENST00000516877 103 ntBASIC2.09□□□□□ -2.07
PCDHB1Q9Y5F3 MIR6844-201ENST00000637122 62 ntBASIC2.09□□□□□ -2.07
PCDHB1Q9Y5F3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-1084P-201ENST00000362498 107 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms