Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 RNU6-496P-201ENST00000516145 99 ntBASIC0.26□□□□□ -2.37
LRRC42Q9Y546 RNU6-699P-201ENST00000517081 110 ntBASIC0.26□□□□□ -2.37
LRRC42Q9Y546 RNU6-1223P-201ENST00000517124 104 ntBASIC0.26□□□□□ -2.37
LRRC42Q9Y546 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.26□□□□□ -2.37
LRRC42Q9Y546 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.26□□□□□ -2.37
LRRC42Q9Y546 MIR3145-201ENST00000580727 82 ntBASIC0.26□□□□□ -2.37
LRRC42Q9Y546 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.26□□□□□ -2.37
LRRC42Q9Y546 AC006441.5-201ENST00000612680 209 ntBASIC0.26□□□□□ -2.37
LRRC42Q9Y546 AC133104.2-201ENST00000615272 193 ntBASIC0.26□□□□□ -2.37
LRRC42Q9Y546 MIR4272-201ENST00000635924 64 ntBASIC0.26□□□□□ -2.37
LRRC42Q9Y546 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.25□□□□□ -2.37
LRRC42Q9Y546 SNORA1.2-201ENST00000365189 134 ntBASIC0.25□□□□□ -2.37
LRRC42Q9Y546 Y_RNA.462-201ENST00000384268 102 ntBASIC0.25□□□□□ -2.37
LRRC42Q9Y546 RNU6-342P-201ENST00000384521 104 ntBASIC0.25□□□□□ -2.37
LRRC42Q9Y546 SNORD11-201ENST00000459124 84 ntBASIC0.25□□□□□ -2.37
LRRC42Q9Y546 Y_RNA.638-201ENST00000459374 113 ntBASIC0.25□□□□□ -2.37
LRRC42Q9Y546 RNU6-437P-201ENST00000459408 95 ntBASIC0.25□□□□□ -2.37
LRRC42Q9Y546 AC243829.3-201ENST00000622177 108 ntBASIC0.25□□□□□ -2.37
LRRC42Q9Y546 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.24□□□□□ -2.37
LRRC42Q9Y546 RNU6-674P-201ENST00000363831 107 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 RNU6-934P-201ENST00000365154 107 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 RNU6-1040P-201ENST00000383974 107 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 SNORD116-29-201ENST00000384516 83 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 RNU6-847P-201ENST00000411115 108 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 AC024067.1-201ENST00000426199 223 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 RNU6-977P-201ENST00000516411 103 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 RPL23AP91-201ENST00000569211 455 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 MIR4771-2-201ENST00000577758 74 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 MIR3612-201ENST00000579753 87 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 MIR2681-201ENST00000581814 105 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 MIR4771-1-201ENST00000582617 74 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 MIR4264-201ENST00000583520 66 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 AP000753.3-201ENST00000604083 169 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 AL080274.1-201ENST00000605565 220 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 AC092794.1-201ENST00000612734 582 ntBASIC0.24□□□□□ -2.37
LRRC42Q9Y546 Y_RNA.4-201ENST00000362333 112 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 RNU6-1048P-201ENST00000364054 107 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 RNU4-50P-201ENST00000364361 141 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 RNU4-45P-201ENST00000365469 141 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 VTRNA1-3-201ENST00000365645 89 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 MIR499A-201ENST00000384903 122 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 RNY4P36-201ENST00000391116 96 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 SNORA36B-201ENST00000410438 131 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 RNU2-14P-201ENST00000411053 191 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 AC090844.1-201ENST00000422019 156 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 BTF3P11-201ENST00000426582 477 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 RNU7-141P-201ENST00000459304 62 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 AC010655.3-201ENST00000478818 450 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 SCARNA8-201ENST00000515924 131 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 RNU7-110P-201ENST00000516891 62 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 MIR4804-201ENST00000581683 73 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 AC005357.1-201ENST00000588399 301 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 LARP7P1-201ENST00000605576 316 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 AC025253.1-201ENST00000613623 543 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 uc_338.4-201ENST00000616635 176 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 MTND4LP32-201ENST00000636111 270 ntBASIC0.23□□□□□ -2.37
LRRC42Q9Y546 Y_RNA.248-201ENST00000364501 109 ntBASIC0.22□□□□□ -2.37
LRRC42Q9Y546 Y_RNA.259-201ENST00000364619 101 ntBASIC0.22□□□□□ -2.37
LRRC42Q9Y546 SNORA72.4-201ENST00000384174 132 ntBASIC0.22□□□□□ -2.37
LRRC42Q9Y546 Y_RNA.458-201ENST00000384240 102 ntBASIC0.22□□□□□ -2.37
LRRC42Q9Y546 Y_RNA.463-201ENST00000384271 102 ntBASIC0.22□□□□□ -2.37
LRRC42Q9Y546 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.22□□□□□ -2.37
LRRC42Q9Y546 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.22□□□□□ -2.37
LRRC42Q9Y546 MIR4676-201ENST00000583078 72 ntBASIC0.22□□□□□ -2.37
LRRC42Q9Y546 Y_RNA.772-201ENST00000606692 102 ntBASIC0.22□□□□□ -2.37
LRRC42Q9Y546 AC011373.1-201ENST00000607270 237 ntBASIC0.22□□□□□ -2.37
LRRC42Q9Y546 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.22□□□□□ -2.37
LRRC42Q9Y546 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.22□□□□□ -2.37
LRRC42Q9Y546 RNU1-133P-201ENST00000364867 167 ntBASIC0.21□□□□□ -2.38
LRRC42Q9Y546 SNORA24-201ENST00000384096 131 ntBASIC0.21□□□□□ -2.38
LRRC42Q9Y546 Y_RNA.496-201ENST00000384444 101 ntBASIC0.21□□□□□ -2.38
LRRC42Q9Y546 Y_RNA.551-201ENST00000384661 102 ntBASIC0.21□□□□□ -2.38
LRRC42Q9Y546 MIR216A-201ENST00000385063 110 ntBASIC0.21□□□□□ -2.38
LRRC42Q9Y546 RNU4-30P-201ENST00000410245 143 ntBASIC0.21□□□□□ -2.38
LRRC42Q9Y546 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.21□□□□□ -2.38
LRRC42Q9Y546 AC091959.1-201ENST00000495857 238 ntBASIC0.21□□□□□ -2.38
LRRC42Q9Y546 RNU7-25P-201ENST00000516544 62 ntBASIC0.21□□□□□ -2.38
LRRC42Q9Y546 AL162730.1-201ENST00000605734 292 ntBASIC0.21□□□□□ -2.38
LRRC42Q9Y546 AC020891.4-201ENST00000605745 93 ntBASIC0.21□□□□□ -2.38
LRRC42Q9Y546 uc_338.6-201ENST00000613544 171 ntBASIC0.21□□□□□ -2.38
LRRC42Q9Y546 RNU6-801P-201ENST00000364087 105 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 Y_RNA.242-201ENST00000364473 110 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 Y_RNA.428-201ENST00000384078 102 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 SNORD63-201ENST00000384262 68 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 RNU6-937P-201ENST00000384325 106 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 RNU7-62P-201ENST00000458856 62 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 RNU6-277P-201ENST00000516272 106 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 SNORD116.3-201ENST00000517176 78 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 MIR4711-201ENST00000578274 70 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 AL121655.1-201ENST00000605811 308 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.2□□□□□ -2.38
LRRC42Q9Y546 AC092634.7-201ENST00000621022 103 ntBASIC0.2□□□□□ -2.38
LRRC42Q9Y546 AL589743.1-201ENST00000551932 2712 ntBASIC0.19□□□□□ -2.38
LRRC42Q9Y546 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
LRRC42Q9Y546 RNU6-1115P-201ENST00000362490 106 ntBASIC0.19□□□□□ -2.38
LRRC42Q9Y546 RNU4-80P-201ENST00000363200 141 ntBASIC0.19□□□□□ -2.38
LRRC42Q9Y546 Y_RNA.164-201ENST00000363709 102 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms