Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AP000942.3-201ENST00000603702 160 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 JPX_2.1-201ENST00000614161 69 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.61□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.7-201ENST00000362352 102 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 RNU6-1031P-201ENST00000384773 107 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 MIR522-201ENST00000385071 87 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 MIR517C-201ENST00000385103 95 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 MIR616-201ENST00000385293 97 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 MT-TR-201ENST00000387439 65 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 RNA5SP482-201ENST00000391269 118 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 RN7SKP200-201ENST00000410564 320 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 MLLT10P1-201ENST00000418346 262 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 AL603825.1-201ENST00000438481 80 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.61□□□□□ -2.15
SIX4Q9UIU6 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 RNA5SP481-201ENST00000516814 122 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 MIR4709-201ENST00000577272 72 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 MIR5688-201ENST00000580619 83 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 MIR2681-201ENST00000581814 105 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 AL049861.1-201ENST00000603130 150 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 AC021506.2-201ENST00000612354 169 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 AC004792.1-201ENST00000614523 137 ntBASIC1.61□□□□□ -2.15
SIX4Q9UIU6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.238-201ENST00000364441 102 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.435-201ENST00000384095 112 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 RNU6-950P-201ENST00000384651 107 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 SNORA67.6-201ENST00000391093 99 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 RNA5SP496-201ENST00000391240 109 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 MIR934-201ENST00000401241 83 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 CALM2P4-201ENST00000430810 426 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.6□□□□□ -2.15
SIX4Q9UIU6 RNU6-1219P-201ENST00000516143 112 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 RNU7-28P-201ENST00000516759 62 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.6□□□□□ -2.15
SIX4Q9UIU6 MIR3198-2-201ENST00000577868 80 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 AL391903.3-201ENST00000612158 163 ntBASIC1.6□□□□□ -2.15
SIX4Q9UIU6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.59□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.233-201ENST00000364407 101 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 U8.5-201ENST00000364528 136 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 RNU4-70P-201ENST00000384579 139 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.587-201ENST00000391210 103 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 AL606845.1-201ENST00000404881 255 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 AL034345.1-201ENST00000407768 123 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.59□□□□□ -2.15
SIX4Q9UIU6 PIGPP3-201ENST00000425307 415 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 RNU7-120P-201ENST00000459334 63 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 SNORA44.1-201ENST00000517031 108 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.59□□□□□ -2.15
SIX4Q9UIU6 MIR4762-201ENST00000585261 75 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 SNORA28-201ENST00000606769 126 ntBASIC1.59□□□□□ -2.15
SIX4Q9UIU6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SIX4Q9UIU6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SIX4Q9UIU6 MIRLET7C-201ENST00000362160 84 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 Y_RNA.121-201ENST00000363309 113 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 RNU6-103P-201ENST00000363686 107 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 RNU6-682P-201ENST00000363843 106 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 Y_RNA.182-201ENST00000363880 111 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 Y_RNA.412-201ENST00000384001 104 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 RNU6-131P-201ENST00000391144 107 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 U8.16-201ENST00000391279 133 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 RN7SKP51-201ENST00000410781 304 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 AL354695.1-201ENST00000427935 228 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.58□□□□□ -2.16
SIX4Q9UIU6 RNU6-561P-201ENST00000516222 102 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 RNU6-861P-201ENST00000516745 106 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 RNU6-182P-201ENST00000516970 105 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 SNORA31.24-201ENST00000517232 57 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.58□□□□□ -2.16
SIX4Q9UIU6 MIR4744-201ENST00000581563 82 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 AC072026.1-201ENST00000605023 201 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 AC108706.1-201ENST00000611053 297 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 uc_338.4-201ENST00000616635 176 ntBASIC1.58□□□□□ -2.16
SIX4Q9UIU6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SIX4Q9UIU6 RNU6-203P-201ENST00000384038 104 ntBASIC1.57□□□□□ -2.16
SIX4Q9UIU6 RNU6-424P-201ENST00000384367 105 ntBASIC1.57□□□□□ -2.16
SIX4Q9UIU6 SNORD72-201ENST00000390994 80 ntBASIC1.57□□□□□ -2.16
SIX4Q9UIU6 FTH1P12-201ENST00000432137 551 ntBASIC1.57□□□□□ -2.16
SIX4Q9UIU6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.57□□□□□ -2.16
SIX4Q9UIU6 RNA5SP168-201ENST00000516642 112 ntBASIC1.57□□□□□ -2.16
SIX4Q9UIU6 RNU7-149P-201ENST00000516739 59 ntBASIC1.57□□□□□ -2.16
SIX4Q9UIU6 AC008507.4-201ENST00000585464 127 ntBASIC1.57□□□□□ -2.16
SIX4Q9UIU6 FTX_2.1-201ENST00000618816 94 ntBASIC1.57□□□□□ -2.16
SIX4Q9UIU6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.57□□□□□ -2.16
SIX4Q9UIU6 AC095038.3-201ENST00000634439 195 ntBASIC1.57□□□□□ -2.16
SIX4Q9UIU6 U6.106-201ENST00000636360 105 ntBASIC1.57□□□□□ -2.16
SIX4Q9UIU6 Y_RNA.150-201ENST00000363562 102 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 SNORD50B-201ENST00000364995 70 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 RNU6-360P-201ENST00000390944 104 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 RNU6-578P-201ENST00000390980 103 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 Y_RNA.622-201ENST00000411091 108 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 AP1B1P2-201ENST00000416196 106 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 BTF3P4-201ENST00000418852 495 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 RNU7-95P-201ENST00000459222 64 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 AC074198.2-201ENST00000508153 258 ntBASIC1.56□□□□□ -2.16
SIX4Q9UIU6 Y_RNA.797-201ENST00000515977 94 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms