Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 MIR3646-201ENST00000578301 84 ntBASIC2.24□□□□□ -2.05
USP25Q9UHP3 AL049861.1-201ENST00000603130 150 ntBASIC2.24□□□□□ -2.05
USP25Q9UHP3 AC097639.2-201ENST00000603159 172 ntBASIC2.24□□□□□ -2.05
USP25Q9UHP3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.24□□□□□ -2.05
USP25Q9UHP3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.24□□□□□ -2.05
USP25Q9UHP3 SNORA63D-201ENST00000364359 132 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 RNU6-1138P-201ENST00000365359 106 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 Y_RNA.432-201ENST00000384087 111 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 RNU6-131P-201ENST00000391144 107 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 AL445646.1-201ENST00000431784 216 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 snoU13.23-201ENST00000458863 104 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 RPL23AP42-201ENST00000471152 471 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 RNU6-126P-201ENST00000516685 103 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 RNA5SP481-201ENST00000516814 122 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 MIR5089-201ENST00000580047 84 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 SNRPGP19-201ENST00000603826 189 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 JPX_2.1-201ENST00000614161 69 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 MIR3658-201ENST00000636291 56 ntBASIC2.23□□□□□ -2.05
USP25Q9UHP3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USP25Q9UHP3 Y_RNA.253-201ENST00000364562 112 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 RNU6-818P-201ENST00000364837 108 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 RNU4-11P-201ENST00000365287 132 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 RNU6-597P-201ENST00000365620 102 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 Y_RNA.393-201ENST00000383936 102 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 SNORA64-201ENST00000384674 134 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 AL023284.1-201ENST00000403956 276 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 SNORA79-201ENST00000408376 140 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USP25Q9UHP3 RPS27P1-201ENST00000450552 247 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 AC023449.1-201ENST00000454464 154 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 HMGN1P7-201ENST00000491722 313 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 AL163195.1-201ENST00000496941 348 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 RNA5SP153-201ENST00000516498 76 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 RNU6-1291P-201ENST00000516591 104 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 AP002004.2-201ENST00000531656 154 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 MIR548X2-201ENST00000579776 100 ntBASIC2.22□□□□□ -2.05
USP25Q9UHP3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.22□□□□□ -2.05
USP25Q9UHP3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.22□□□□□ -2.05
USP25Q9UHP3 RNU6-1080P-201ENST00000383982 107 ntBASIC2.21□□□□□ -2.06
USP25Q9UHP3 RNU6-1299P-201ENST00000516316 100 ntBASIC2.21□□□□□ -2.06
USP25Q9UHP3 DEFB122-202ENST00000569013 197 ntBASIC2.21□□□□□ -2.06
USP25Q9UHP3 MIR4662B-201ENST00000579498 81 ntBASIC2.21□□□□□ -2.06
USP25Q9UHP3 MIR378D2-201ENST00000580636 98 ntBASIC2.21□□□□□ -2.06
USP25Q9UHP3 AC012493.3-201ENST00000604494 112 ntBASIC2.21□□□□□ -2.06
USP25Q9UHP3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.21□□□□□ -2.06
USP25Q9UHP3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
USP25Q9UHP3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
USP25Q9UHP3 RNU6-661P-201ENST00000362409 107 ntBASIC2.2□□□□□ -2.06
USP25Q9UHP3 RNU6-978P-201ENST00000364371 103 ntBASIC2.2□□□□□ -2.06
USP25Q9UHP3 Y_RNA.497-201ENST00000384447 98 ntBASIC2.2□□□□□ -2.06
USP25Q9UHP3 RNU6-768P-201ENST00000384683 107 ntBASIC2.2□□□□□ -2.06
USP25Q9UHP3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
USP25Q9UHP3 HSPE1P9-201ENST00000440046 311 ntBASIC2.2□□□□□ -2.06
USP25Q9UHP3 NDUFA4P2-201ENST00000489989 244 ntBASIC2.2□□□□□ -2.06
USP25Q9UHP3 OR9P1P-201ENST00000496431 281 ntBASIC2.2□□□□□ -2.06
USP25Q9UHP3 RPL23AP63-201ENST00000498752 471 ntBASIC2.2□□□□□ -2.06
USP25Q9UHP3 RNU6-426P-201ENST00000516464 97 ntBASIC2.2□□□□□ -2.06
USP25Q9UHP3 AC087685.1-201ENST00000587507 141 ntBASIC2.2□□□□□ -2.06
USP25Q9UHP3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.2□□□□□ -2.06
USP25Q9UHP3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USP25Q9UHP3 SNORA1B-201ENST00000362535 133 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
USP25Q9UHP3 RNU6-360P-201ENST00000390944 104 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 SNORA26-201ENST00000391286 122 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 SNORA75.5-201ENST00000391291 81 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 AC233266.1-201ENST00000454518 96 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 RNU7-149P-201ENST00000516739 59 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 RNA5SP437-201ENST00000517249 129 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 AC022217.4-201ENST00000604389 163 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 AC242852.1-201ENST00000612151 96 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 AC244015.1-201ENST00000622301 99 ntBASIC2.19□□□□□ -2.06
USP25Q9UHP3 SNORA67.3-201ENST00000384366 140 ntBASIC2.18□□□□□ -2.06
USP25Q9UHP3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.18□□□□□ -2.06
USP25Q9UHP3 MIR513C-201ENST00000401352 84 ntBASIC2.18□□□□□ -2.06
USP25Q9UHP3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.18□□□□□ -2.06
USP25Q9UHP3 RPL30P13-201ENST00000418873 348 ntBASIC2.18□□□□□ -2.06
USP25Q9UHP3 FTH1P12-201ENST00000432137 551 ntBASIC2.18□□□□□ -2.06
USP25Q9UHP3 SNRPGP10-201ENST00000432323 225 ntBASIC2.18□□□□□ -2.06
USP25Q9UHP3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.18□□□□□ -2.06
USP25Q9UHP3 RNU7-197P-201ENST00000458836 62 ntBASIC2.18□□□□□ -2.06
USP25Q9UHP3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.18□□□□□ -2.06
USP25Q9UHP3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.18□□□□□ -2.06
USP25Q9UHP3 AC112693.2-201ENST00000556538 232 ntBASIC2.18□□□□□ -2.06
USP25Q9UHP3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
USP25Q9UHP3 RNU6-199P-201ENST00000362954 107 ntBASIC2.17□□□□□ -2.06
USP25Q9UHP3 Y_RNA.634-201ENST00000364811 113 ntBASIC2.17□□□□□ -2.06
USP25Q9UHP3 Y_RNA.586-201ENST00000391146 98 ntBASIC2.17□□□□□ -2.06
USP25Q9UHP3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.17□□□□□ -2.06
USP25Q9UHP3 AL049830.1-201ENST00000468034 425 ntBASIC2.17□□□□□ -2.06
USP25Q9UHP3 SNORA44.1-201ENST00000517031 108 ntBASIC2.17□□□□□ -2.06
USP25Q9UHP3 MIR4762-201ENST00000585261 75 ntBASIC2.17□□□□□ -2.06
USP25Q9UHP3 AC120024.3-201ENST00000603167 156 ntBASIC2.17□□□□□ -2.06
USP25Q9UHP3 AC103810.8-201ENST00000607347 118 ntBASIC2.17□□□□□ -2.06
USP25Q9UHP3 AL591926.4-201ENST00000616895 298 ntBASIC2.17□□□□□ -2.06
USP25Q9UHP3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.17□□□□□ -2.06
USP25Q9UHP3 MIR6844-201ENST00000637122 62 ntBASIC2.17□□□□□ -2.06
USP25Q9UHP3 SNORD114-1-201ENST00000362705 72 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms