Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU6-453P-201ENST00000516819 85 ntBASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 MIR3910-1-201ENST00000580936 111 ntBASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 Z83818.1-201ENST00000603584 150 ntBASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 AC037487.3-201ENST00000606668 112 ntBASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 AL121890.5-201ENST00000620848 304 ntBASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 MIR8063-201ENST00000621930 81 ntBASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 U6.106-201ENST00000636360 105 ntBASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 AC100821.1-201ENST00000523153 2479 ntBASIC1.45□□□□□ -2.18
CLIP2Q9UDT6 ICE2P2-201ENST00000483823 2787 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.240-201ENST00000364469 95 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.243-201ENST00000364481 109 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.361-201ENST00000365515 120 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.412-201ENST00000384001 104 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 RNU6-746P-201ENST00000384112 109 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.464-201ENST00000384282 110 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 RNU6-394P-201ENST00000410735 107 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 AC016909.1-201ENST00000415916 166 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 AL390729.2-201ENST00000416137 156 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 snoU13.27-201ENST00000459278 104 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 COX6CP14-201ENST00000469580 174 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 RPS26P55-201ENST00000471178 356 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 AC099513.1-201ENST00000490423 301 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 RNU6-1278P-201ENST00000516130 107 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 RNU6-63P-201ENST00000516690 95 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 AC024995.1-201ENST00000523014 93 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 AC090821.2-201ENST00000523552 176 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 AC100767.1-201ENST00000528178 123 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 MIR3144-201ENST00000579460 79 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 snoZ196.1-201ENST00000625269 89 ntBASIC1.44□□□□□ -2.18
CLIP2Q9UDT6 RNY1P11-201ENST00000363759 113 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 SNORD1A-201ENST00000364968 72 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.310-201ENST00000365063 113 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.571-201ENST00000384753 98 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 MT-TT-201ENST00000387460 66 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 RNU6-221P-201ENST00000459541 99 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 AC091021.1-201ENST00000468051 388 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 RNU7-200P-201ENST00000516105 62 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 RNU6-561P-201ENST00000516222 102 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 AC072026.1-201ENST00000605023 201 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 AC095038.3-201ENST00000634439 195 ntBASIC1.43□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.262-201ENST00000364641 102 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 SNORA72.4-201ENST00000384174 132 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 MIR194-1-201ENST00000384892 85 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 RNU6-381P-201ENST00000391259 108 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 MIR1185-2-201ENST00000408687 86 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 RNU6-855P-201ENST00000410395 104 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 RNU6-383P-201ENST00000410864 94 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 RNU6-57P-201ENST00000411348 103 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 AC008134.1-201ENST00000420943 193 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 RNU7-141P-201ENST00000459304 62 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.662-201ENST00000516028 97 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.703-201ENST00000516846 111 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 AC015688.6-201ENST00000577737 104 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 AC004832.4-201ENST00000608952 331 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.42□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.24-201ENST00000362508 103 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 U3.8-201ENST00000363675 217 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 Y_RNA.287-201ENST00000364853 94 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 U8.7-201ENST00000364940 136 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 SNORA25.9-201ENST00000365087 128 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 RNU6-1310P-201ENST00000384153 107 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 SNORA20B-201ENST00000384220 132 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 MIR1287-201ENST00000408492 90 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 MIR1278-201ENST00000408753 81 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 TOMM22P2-201ENST00000430735 237 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 SEPT7P4-201ENST00000437076 306 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 AC027119.1-201ENST00000440877 241 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 AC025647.1-201ENST00000517879 253 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 CYCSP23-201ENST00000519781 313 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 AC136628.3-201ENST00000521868 290 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 MIR5692C2-201ENST00000577959 77 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 AC013791.1-201ENST00000616619 62 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 MIR3658-201ENST00000636291 56 ntBASIC1.41□□□□□ -2.18
CLIP2Q9UDT6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 RNU1-22P-201ENST00000363334 158 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 SNORA33-201ENST00000363664 130 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.182-201ENST00000363880 111 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.341-201ENST00000365341 102 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 SNORD116-18-201ENST00000383961 92 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.435-201ENST00000384095 112 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 RNU6-136P-201ENST00000384663 107 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 RNU6-417P-201ENST00000384712 107 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 MIR499A-201ENST00000384903 122 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 RNU6-131P-201ENST00000391144 107 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 MIR1276-201ENST00000408707 83 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 RPS20P10-201ENST00000451209 253 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms