Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 snoU2-30.1-201ENST00000365012 70 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 RNU6-806P-201ENST00000365147 105 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 MIR215-201ENST00000384858 110 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 MIR452-201ENST00000385020 85 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 SNORD115-46-201ENST00000390982 71 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 SNORA26.5-201ENST00000391215 123 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 AC245047.7-201ENST00000440265 293 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 LINC01399-202ENST00000458450 244 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.77□□□□□ -2.29
LHX9Q9NQ69 RNU6-496P-201ENST00000516145 99 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 RNU6-191P-201ENST00000516295 94 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 RNU7-116P-201ENST00000516940 62 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 RNA5SP404-201ENST00000517118 132 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 AC020661.2-201ENST00000560114 134 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 AC127455.1-201ENST00000565496 145 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 MIR3192-201ENST00000584920 77 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.77□□□□□ -2.29
LHX9Q9NQ69 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.77□□□□□ -2.29
LHX9Q9NQ69 AC027335.2-201ENST00000624030 375 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 RNU6-1209P-201ENST00000363655 107 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.222-201ENST00000364264 102 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 RNU1-133P-201ENST00000364867 167 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 SNORA72.4-201ENST00000384174 132 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
LHX9Q9NQ69 MTCO2P33-201ENST00000402100 465 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 SNORA36B-201ENST00000410438 131 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 RNU6-1054P-201ENST00000411293 104 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 RPL21P38-201ENST00000418090 167 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 ELOCP20-201ENST00000422460 345 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 RPL39P39-201ENST00000455840 151 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 MRPS35P2-201ENST00000508242 191 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 SNORA31.4-201ENST00000516049 129 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 RNU6-1153P-201ENST00000516760 105 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 SNORA18.7-201ENST00000516910 131 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 RNU6-1137P-201ENST00000517073 99 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 AC136628.3-201ENST00000521868 290 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.76□□□□□ -2.29
LHX9Q9NQ69 AL357312.1-201ENST00000603879 298 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 JPX_2.1-201ENST00000614161 69 ntBASIC0.76□□□□□ -2.29
LHX9Q9NQ69 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.76□□□□□ -2.29
LHX9Q9NQ69 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LHX9Q9NQ69 SNORA25.3-201ENST00000363205 127 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.210-201ENST00000364161 110 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.214-201ENST00000364201 112 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 SNORA63.7-201ENST00000365579 123 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.569-201ENST00000384749 103 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 RNU6-763P-201ENST00000390865 106 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 MTCO1P5-201ENST00000433573 344 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 NDUFA4P2-201ENST00000489989 244 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 RNY3P15-201ENST00000516297 97 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 RNU6-764P-201ENST00000516396 105 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 SNORA40.15-201ENST00000516884 107 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 AC131281.1-201ENST00000522984 164 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.75□□□□□ -2.29
LHX9Q9NQ69 MIR4714-201ENST00000580728 77 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 MIR4680-201ENST00000580906 66 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 AC005357.1-201ENST00000588399 301 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 AL020996.3-201ENST00000606617 222 ntBASIC0.75□□□□□ -2.29
LHX9Q9NQ69 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.19-201ENST00000362462 99 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 RNU4-90P-201ENST00000362773 141 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 snoU2_19.2-201ENST00000363024 80 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 AC117470.1-201ENST00000381974 330 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.455-201ENST00000384230 98 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.541-201ENST00000384640 113 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 MIR136-201ENST00000385207 82 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 U8.19-201ENST00000459095 133 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 RNU6-437P-201ENST00000459408 95 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 RPS26P48-201ENST00000491713 339 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.74□□□□□ -2.29
LHX9Q9NQ69 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.74□□□□□ -2.29
LHX9Q9NQ69 RNU7-41P-201ENST00000515917 61 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.721-201ENST00000517207 102 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 RPL23AP91-201ENST00000569211 455 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 AC113195.1-201ENST00000579952 141 ntBASIC0.74□□□□□ -2.29
LHX9Q9NQ69 AC068700.1-201ENST00000565862 3754 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.64-201ENST00000362845 102 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.158-201ENST00000363651 101 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 RNU6-770P-201ENST00000363929 105 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 SNORD14E-201ENST00000364009 85 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 MIR7-2-201ENST00000384970 110 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 MIR520C-201ENST00000385005 87 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 SNORD72-201ENST00000390994 80 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.581-201ENST00000391017 97 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 SNORA75.2-201ENST00000391138 150 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 SNORA75.3-201ENST00000391231 150 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.73□□□□□ -2.29
LHX9Q9NQ69 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.73□□□□□ -2.29
LHX9Q9NQ69 MTND5P22-201ENST00000458380 195 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 SNORD79.1-201ENST00000516069 84 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.701-201ENST00000516812 110 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 SNORA74.3-201ENST00000517108 154 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 DEFB108E-201ENST00000524692 240 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.73□□□□□ -2.29
LHX9Q9NQ69 AL356055.1-201ENST00000602528 446 ntBASIC0.73□□□□□ -2.29
LHX9Q9NQ69 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms