Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 AL355297.3-201ENST00000604082 446 ntBASIC0.98□□□□□ -2.25
VIPAS39Q9H9C1 AC068700.1-201ENST00000565862 3754 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 SNORA25.1-201ENST00000362326 128 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-1205P-201ENST00000363625 106 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 Y_RNA.330-201ENST00000365230 109 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-442P-201ENST00000383968 104 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 MIR570-201ENST00000384917 97 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 AC063976.4-201ENST00000421971 163 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 BTF3P11-201ENST00000426582 477 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 AC245047.8-201ENST00000456455 284 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-1053P-201ENST00000515930 101 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 RNU2-31P-201ENST00000516954 155 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 SCARNA24.2-201ENST00000516968 130 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 MIR2681-201ENST00000581814 105 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 AC136443.5-201ENST00000603741 370 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 PRELID3BP2-201ENST00000605362 201 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 AL391903.3-201ENST00000612158 163 ntBASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
VIPAS39Q9H9C1 RNU6-674P-201ENST00000363831 107 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 Y_RNA.327-201ENST00000365201 102 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 SNORA33.2-201ENST00000365413 134 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 SNORD38C-201ENST00000384381 69 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 SNORA80D-201ENST00000384488 135 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 SNORD28B-201ENST00000390993 75 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 SNORA53-201ENST00000391141 249 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 SNORD124-201ENST00000459577 104 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 AC091959.1-201ENST00000495857 238 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 RNU6-570P-201ENST00000517051 105 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 MIR4498-201ENST00000577599 66 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 AC008507.4-201ENST00000585464 127 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 AC044792.1-201ENST00000593294 196 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 AC012676.2-201ENST00000619258 186 ntBASIC0.96□□□□□ -2.26
VIPAS39Q9H9C1 Y_RNA.152-201ENST00000363578 100 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 RNU6-268P-201ENST00000364174 107 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 Y_RNA.293-201ENST00000364908 93 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 RNU6-514P-201ENST00000384208 107 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 AL603910.2-201ENST00000407268 136 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 AC113618.1-201ENST00000416747 285 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 MTCYBP6-201ENST00000441810 138 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 SNORD11-201ENST00000459124 84 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 TRMT112P2-201ENST00000512910 132 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 SNORD116-28-201ENST00000516123 91 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 MIR548AR-201ENST00000582191 57 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 AC037487.3-201ENST00000606668 112 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 AC013791.1-201ENST00000616619 62 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 AC007742.2-201ENST00000618226 398 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 AC015726.2-201ENST00000620112 122 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 AC091895.1-201ENST00000624494 256 ntBASIC0.95□□□□□ -2.26
VIPAS39Q9H9C1 MIR103A2-201ENST00000362154 78 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 Y_RNA.84-201ENST00000363011 104 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 RNA5SP264-201ENST00000363115 107 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 RNU4-10P-201ENST00000364383 140 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 RNU6-639P-201ENST00000384074 107 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 Y_RNA.512-201ENST00000384518 102 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 RNU6-985P-201ENST00000410182 104 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 AC005534.2-201ENST00000431047 433 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 SNRPGP14-201ENST00000435400 219 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 RNU7-181P-201ENST00000517234 74 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 MIR5692C2-201ENST00000577959 77 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 AL359821.1-201ENST00000605519 182 ntBASIC0.94□□□□□ -2.26
VIPAS39Q9H9C1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 RNU6-1272P-201ENST00000362776 107 ntBASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 RNU1-124P-201ENST00000363861 145 ntBASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 RNU6-326P-201ENST00000365480 107 ntBASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 RNU7-21P-201ENST00000459430 62 ntBASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 RPS23P4-201ENST00000487908 423 ntBASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 AC023827.1-201ENST00000569247 97 ntBASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 AL049861.1-201ENST00000603130 150 ntBASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 snoU18.1-201ENST00000629629 71 ntBASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
VIPAS39Q9H9C1 MIR337-201ENST00000362281 93 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 RNU6-1227P-201ENST00000383981 107 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 MIR15B-201ENST00000385045 98 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 MIR1185-1-201ENST00000408598 86 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 MTATP8P1-201ENST00000467115 207 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 AC087343.1-201ENST00000477341 475 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 AC005840.1-201ENST00000498412 377 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 RN7SKP164-201ENST00000516138 266 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 RNU7-43P-201ENST00000516554 64 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 DEFB108E-201ENST00000524692 240 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 AC087685.1-201ENST00000587507 141 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 Pinc.1-201ENST00000616452 154 ntBASIC0.92□□□□□ -2.26
VIPAS39Q9H9C1 Y_RNA.14-201ENST00000362415 103 ntBASIC0.91□□□□□ -2.26
VIPAS39Q9H9C1 RNU6-238P-201ENST00000363313 106 ntBASIC0.91□□□□□ -2.26
VIPAS39Q9H9C1 Y_RNA.276-201ENST00000364732 109 ntBASIC0.91□□□□□ -2.26
VIPAS39Q9H9C1 RNU6-144P-201ENST00000383951 107 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms