Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MIRLET7C-201ENST00000362160 84 ntBASIC2.35□□□□□ -2.03
CCDC113Q9H0I3 RNU6-1062P-201ENST00000383908 107 ntBASIC2.35□□□□□ -2.03
CCDC113Q9H0I3 AL160236.1-201ENST00000556317 195 ntBASIC2.35□□□□□ -2.03
CCDC113Q9H0I3 MIR4713-201ENST00000582691 75 ntBASIC2.35□□□□□ -2.03
CCDC113Q9H0I3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CCDC113Q9H0I3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC113Q9H0I3 RNU6-833P-201ENST00000363486 107 ntBASIC2.34□□□□□ -2.03
CCDC113Q9H0I3 SNORA67.3-201ENST00000384366 140 ntBASIC2.34□□□□□ -2.03
CCDC113Q9H0I3 RNU6-394P-201ENST00000410735 107 ntBASIC2.34□□□□□ -2.03
CCDC113Q9H0I3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.34□□□□□ -2.03
CCDC113Q9H0I3 MIR3144-201ENST00000579460 79 ntBASIC2.34□□□□□ -2.03
CCDC113Q9H0I3 MIR424-201ENST00000362227 98 ntBASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 Y_RNA.91-201ENST00000363042 107 ntBASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 RNU6-449P-201ENST00000383914 107 ntBASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 RNU6-804P-201ENST00000384286 107 ntBASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 SNORD38C-201ENST00000384381 69 ntBASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 MIR660-201ENST00000385235 97 ntBASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 MIR1261-201ENST00000408659 82 ntBASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 AC104435.1-201ENST00000483483 166 ntBASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 AC099513.1-201ENST00000490423 301 ntBASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 SNORD116-25-201ENST00000516517 92 ntBASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 MIR5002-201ENST00000584713 97 ntBASIC2.33□□□□□ -2.04
CCDC113Q9H0I3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC113Q9H0I3 RNU6-661P-201ENST00000362409 107 ntBASIC2.32□□□□□ -2.04
CCDC113Q9H0I3 MIR1267-201ENST00000408723 78 ntBASIC2.32□□□□□ -2.04
CCDC113Q9H0I3 AC093850.1-201ENST00000454121 251 ntBASIC2.32□□□□□ -2.04
CCDC113Q9H0I3 Y_RNA.666-201ENST00000516187 112 ntBASIC2.32□□□□□ -2.04
CCDC113Q9H0I3 IGKV3-31-201ENST00000523109 329 ntBASIC2.32□□□□□ -2.04
CCDC113Q9H0I3 MIR4778-201ENST00000577635 80 ntBASIC2.32□□□□□ -2.04
CCDC113Q9H0I3 MIR219B-201ENST00000637023 88 ntBASIC2.32□□□□□ -2.04
CCDC113Q9H0I3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.31□□□□□ -2.04
CCDC113Q9H0I3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCDC113Q9H0I3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCDC113Q9H0I3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCDC113Q9H0I3 SNORD37.2-201ENST00000391075 66 ntBASIC2.31□□□□□ -2.04
CCDC113Q9H0I3 JTBP1-201ENST00000441314 247 ntBASIC2.31□□□□□ -2.04
CCDC113Q9H0I3 RNU6-693P-201ENST00000516134 107 ntBASIC2.31□□□□□ -2.04
CCDC113Q9H0I3 MIR514B-201ENST00000516774 80 ntBASIC2.31□□□□□ -2.04
CCDC113Q9H0I3 AC021753.1-201ENST00000635724 168 ntBASIC2.31□□□□□ -2.04
CCDC113Q9H0I3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CCDC113Q9H0I3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC113Q9H0I3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 RNU6-268P-201ENST00000364174 107 ntBASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 SNORD116-18-201ENST00000383961 92 ntBASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 RNU6-203P-201ENST00000384038 104 ntBASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 RNU6-439P-201ENST00000384188 106 ntBASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 RNU2-40P-201ENST00000410833 196 ntBASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 SNRPGP13-201ENST00000442212 177 ntBASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 AC022254.1-201ENST00000567857 235 ntBASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 AL627230.6-201ENST00000611129 280 ntBASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 AC006441.5-201ENST00000612680 209 ntBASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 MIR8074-201ENST00000615081 81 ntBASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC113Q9H0I3 RNU6-199P-201ENST00000362954 107 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 MIR452-201ENST00000385020 85 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 MIR676-201ENST00000390702 67 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 Y_RNA.580-201ENST00000391004 95 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 AC004965.1-201ENST00000413033 213 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 AL445646.1-201ENST00000431784 216 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 RNA5SP233-201ENST00000459153 113 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 RNU6-1270P-201ENST00000517128 108 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 SUMO2P16-201ENST00000519475 264 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 DEFB122-202ENST00000569013 197 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 DNAJC19P2-201ENST00000593340 302 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 MTND1P7-201ENST00000632801 297 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 MIR6844-201ENST00000637122 62 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 ZNF355P-201ENST00000427301 3216 ntBASIC2.29□□□□□ -2.04
CCDC113Q9H0I3 SNORD114-1-201ENST00000362705 72 ntBASIC2.28□□□□□ -2.04
CCDC113Q9H0I3 SNORA25.7-201ENST00000364375 127 ntBASIC2.28□□□□□ -2.04
CCDC113Q9H0I3 SNORD24-201ENST00000383884 75 ntBASIC2.28□□□□□ -2.04
CCDC113Q9H0I3 Y_RNA.398-201ENST00000383952 99 ntBASIC2.28□□□□□ -2.04
CCDC113Q9H0I3 HMGN2P19-201ENST00000425149 265 ntBASIC2.28□□□□□ -2.04
CCDC113Q9H0I3 AC015922.2-201ENST00000435593 184 ntBASIC2.28□□□□□ -2.04
CCDC113Q9H0I3 snoU13.15-201ENST00000459407 104 ntBASIC2.28□□□□□ -2.04
CCDC113Q9H0I3 RNU7-121P-201ENST00000516604 62 ntBASIC2.28□□□□□ -2.04
CCDC113Q9H0I3 AC097639.2-201ENST00000603159 172 ntBASIC2.28□□□□□ -2.04
CCDC113Q9H0I3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CCDC113Q9H0I3 AP000648.3-201ENST00000623539 4507 ntBASIC2.28□□□□□ -2.04
CCDC113Q9H0I3 RNU6-151P-201ENST00000364158 107 ntBASIC2.27□□□□□ -2.05
CCDC113Q9H0I3 Y_RNA.393-201ENST00000383936 102 ntBASIC2.27□□□□□ -2.05
CCDC113Q9H0I3 SNORD61-201ENST00000384252 73 ntBASIC2.27□□□□□ -2.05
CCDC113Q9H0I3 MIR548O-201ENST00000408583 114 ntBASIC2.27□□□□□ -2.05
CCDC113Q9H0I3 RNU6-717P-201ENST00000459076 104 ntBASIC2.27□□□□□ -2.05
CCDC113Q9H0I3 RNU6-1212P-201ENST00000517023 104 ntBASIC2.27□□□□□ -2.05
CCDC113Q9H0I3 SNORA44.1-201ENST00000517031 108 ntBASIC2.27□□□□□ -2.05
CCDC113Q9H0I3 AC015726.2-201ENST00000620112 122 ntBASIC2.27□□□□□ -2.05
CCDC113Q9H0I3 RNA5SP37-201ENST00000365420 130 ntBASIC2.26□□□□□ -2.05
CCDC113Q9H0I3 RNU6-1130P-201ENST00000365434 107 ntBASIC2.26□□□□□ -2.05
CCDC113Q9H0I3 RNA5SP259-201ENST00000365541 109 ntBASIC2.26□□□□□ -2.05
CCDC113Q9H0I3 MIR548M-201ENST00000408260 86 ntBASIC2.26□□□□□ -2.05
CCDC113Q9H0I3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC113Q9H0I3 RPL23AP42-201ENST00000471152 471 ntBASIC2.26□□□□□ -2.05
CCDC113Q9H0I3 UBL5P3-201ENST00000475112 231 ntBASIC2.26□□□□□ -2.05
CCDC113Q9H0I3 RNU6-255P-201ENST00000516957 105 ntBASIC2.26□□□□□ -2.05
CCDC113Q9H0I3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms