Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AL353621.2-201ENST00000605340 133 ntBASIC1.37□□□□□ -2.19
ZNF541Q9H0D2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.37□□□□□ -2.19
ZNF541Q9H0D2 SNORA25.1-201ENST00000362326 128 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 Y_RNA.136-201ENST00000363444 102 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 RNU6-801P-201ENST00000364087 105 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 MTCO2P33-201ENST00000402100 465 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 MTCO1P5-201ENST00000433573 344 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 AC114811.1-201ENST00000507207 168 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 RNU7-115P-201ENST00000516433 55 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 RNU6-635P-201ENST00000516651 102 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 RN7SKP88-201ENST00000516847 250 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 RNU2-31P-201ENST00000516954 155 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 AL513534.2-201ENST00000603836 250 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 7SK.8-201ENST00000612110 250 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 7SK.11-201ENST00000615477 250 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 MIR548AY-201ENST00000617669 107 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 7SK.13-201ENST00000622040 250 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 AC134026.1-201ENST00000623249 2239 ntBASIC1.36□□□□□ -2.19
ZNF541Q9H0D2 RNU6-238P-201ENST00000363313 106 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 RNU6-1048P-201ENST00000364054 107 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 Y_RNA.253-201ENST00000364562 112 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 RNU1-133P-201ENST00000364867 167 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 RNU6-290P-201ENST00000365212 101 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 RNU6-713P-201ENST00000384761 107 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 RNU2-14P-201ENST00000411053 191 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 MTND2P23-201ENST00000422990 651 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 MTND4LP30-201ENST00000454092 297 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 RPL39P38-201ENST00000467018 153 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 RPL30P7-201ENST00000479312 323 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 RNU6-191P-201ENST00000516295 94 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 RNU6-570P-201ENST00000517051 105 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 AL117187.1-201ENST00000555482 181 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 AP003357.1-201ENST00000604497 148 ntBASIC1.35□□□□□ -2.19
ZNF541Q9H0D2 Y_RNA.203-201ENST00000364106 102 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 snoU2-30.1-201ENST00000365012 70 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 SNORA2.2-201ENST00000365473 135 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 SNORA36B-201ENST00000410438 131 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 RNU6-1203P-201ENST00000410703 110 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 AL358176.2-201ENST00000425769 204 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 HMGN1P33-201ENST00000432945 451 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 RNU7-141P-201ENST00000459304 62 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 RNU6-327P-201ENST00000516270 127 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 AC090821.2-201ENST00000523552 176 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 AL512310.8-201ENST00000550183 120 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 CYP3A52P-201ENST00000563326 91 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 MIR2681-201ENST00000581814 105 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 AC211469.2-201ENST00000605461 205 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 AC008133.2-201ENST00000624540 351 ntBASIC1.34□□□□□ -2.2
ZNF541Q9H0D2 RNU6-833P-201ENST00000363486 107 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.162-201ENST00000363683 102 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.376-201ENST00000365638 108 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.459-201ENST00000384251 102 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 SNORA26.5-201ENST00000391215 123 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 AC023449.1-201ENST00000454464 154 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 RNU6-1338P-201ENST00000516328 91 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 SNORD45.4-201ENST00000516629 73 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 SCARNA24.2-201ENST00000516968 130 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 AC090049.2-201ENST00000550377 109 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 MIR3664-201ENST00000579074 99 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 AC027279.3-201ENST00000625055 122 ntBASIC1.33□□□□□ -2.2
ZNF541Q9H0D2 MIRLET7C-201ENST00000362160 84 ntBASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 RNU6-899P-201ENST00000363947 107 ntBASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 RNU6-326P-201ENST00000365480 107 ntBASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.574-201ENST00000384766 95 ntBASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 MIR522-201ENST00000385071 87 ntBASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 MT-TW-201ENST00000387382 68 ntBASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 RPL39P39-201ENST00000455840 151 ntBASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 RNU6-437P-201ENST00000459408 95 ntBASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 RNU6-1007P-201ENST00000516586 107 ntBASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 GHRLOS.1-201ENST00000610995 70 ntBASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 AP001282.2-201ENST00000616149 309 ntBASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
ZNF541Q9H0D2 AC068700.1-201ENST00000565862 3754 ntBASIC1.31□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.133-201ENST00000363428 110 ntBASIC1.31□□□□□ -2.2
ZNF541Q9H0D2 RNU6-1205P-201ENST00000363625 106 ntBASIC1.31□□□□□ -2.2
ZNF541Q9H0D2 SNORD14E-201ENST00000364009 85 ntBASIC1.31□□□□□ -2.2
ZNF541Q9H0D2 SNORA72.4-201ENST00000384174 132 ntBASIC1.31□□□□□ -2.2
ZNF541Q9H0D2 RNU6-472P-201ENST00000384299 107 ntBASIC1.31□□□□□ -2.2
ZNF541Q9H0D2 MIR452-201ENST00000385020 85 ntBASIC1.31□□□□□ -2.2
ZNF541Q9H0D2 AC127455.1-201ENST00000565496 145 ntBASIC1.31□□□□□ -2.2
ZNF541Q9H0D2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.31□□□□□ -2.2
ZNF541Q9H0D2 MIR8062-201ENST00000621515 85 ntBASIC1.31□□□□□ -2.2
ZNF541Q9H0D2 RNU6-1309P-201ENST00000363305 108 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 RNA5SP457-201ENST00000363657 124 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.293-201ENST00000364908 93 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.483-201ENST00000384380 101 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 MIR568-201ENST00000385036 95 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 RNU6-763P-201ENST00000390865 106 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 MIR1298-201ENST00000408783 112 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 AL118496.2-201ENST00000448300 230 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.637-201ENST00000459424 114 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 TRBVB-201ENST00000477100 408 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms