Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VRK1Q99986 MIR891A-201ENST00000401237 79 ntBASIC1.97□□□□□ -2.09
VRK1Q99986 AL161935.2-201ENST00000414627 60 ntBASIC1.97□□□□□ -2.09
VRK1Q99986 JTBP1-201ENST00000441314 247 ntBASIC1.97□□□□□ -2.09
VRK1Q99986 RNU7-12P-201ENST00000516030 62 ntBASIC1.97□□□□□ -2.09
VRK1Q99986 RNU6-1116P-201ENST00000517269 99 ntBASIC1.97□□□□□ -2.09
VRK1Q99986 MIR378D2-201ENST00000580636 98 ntBASIC1.97□□□□□ -2.09
VRK1Q99986 MIR3124-201ENST00000582636 67 ntBASIC1.97□□□□□ -2.09
VRK1Q99986 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
VRK1Q99986 RNU6-414P-201ENST00000363705 104 ntBASIC1.96□□□□□ -2.1
VRK1Q99986 Y_RNA.337-201ENST00000365312 102 ntBASIC1.96□□□□□ -2.1
VRK1Q99986 SNORD24-201ENST00000383884 75 ntBASIC1.96□□□□□ -2.1
VRK1Q99986 RN7SKP223-201ENST00000410582 62 ntBASIC1.96□□□□□ -2.1
VRK1Q99986 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.96□□□□□ -2.1
VRK1Q99986 RNU6-504P-201ENST00000516568 104 ntBASIC1.96□□□□□ -2.1
VRK1Q99986 MIR4648-201ENST00000580107 72 ntBASIC1.96□□□□□ -2.1
VRK1Q99986 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
VRK1Q99986 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VRK1Q99986 Y_RNA.91-201ENST00000363042 107 ntBASIC1.95□□□□□ -2.1
VRK1Q99986 RNU6-203P-201ENST00000384038 104 ntBASIC1.95□□□□□ -2.1
VRK1Q99986 AC006461.1-201ENST00000412637 326 ntBASIC1.95□□□□□ -2.1
VRK1Q99986 RNU1-41P-201ENST00000516161 162 ntBASIC1.95□□□□□ -2.1
VRK1Q99986 RNU1-48P-201ENST00000516400 162 ntBASIC1.95□□□□□ -2.1
VRK1Q99986 MIR3144-201ENST00000579460 79 ntBASIC1.95□□□□□ -2.1
VRK1Q99986 AC103810.8-201ENST00000607347 118 ntBASIC1.95□□□□□ -2.1
VRK1Q99986 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.95□□□□□ -2.1
VRK1Q99986 SNORD3E-202ENST00000627253 216 ntBASIC1.95□□□□□ -2.1
VRK1Q99986 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VRK1Q99986 AC016717.2-201ENST00000609089 5141 ntBASIC1.95□□□□□ -2.1
VRK1Q99986 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VRK1Q99986 Y_RNA.66-201ENST00000362862 102 ntBASIC1.94□□□□□ -2.1
VRK1Q99986 RNU6-268P-201ENST00000364174 107 ntBASIC1.94□□□□□ -2.1
VRK1Q99986 AC004965.1-201ENST00000413033 213 ntBASIC1.94□□□□□ -2.1
VRK1Q99986 SNORD116-25-201ENST00000516517 92 ntBASIC1.94□□□□□ -2.1
VRK1Q99986 MIR1273D-201ENST00000577266 86 ntBASIC1.94□□□□□ -2.1
VRK1Q99986 RNU6-978P-201ENST00000364371 103 ntBASIC1.93□□□□□ -2.1
VRK1Q99986 RNU6-597P-201ENST00000365620 102 ntBASIC1.93□□□□□ -2.1
VRK1Q99986 snoU13.26-201ENST00000459452 105 ntBASIC1.93□□□□□ -2.1
VRK1Q99986 MIR5007-201ENST00000583098 95 ntBASIC1.93□□□□□ -2.1
VRK1Q99986 AC104465.1-201ENST00000611365 139 ntBASIC1.93□□□□□ -2.1
VRK1Q99986 MIR8074-201ENST00000615081 81 ntBASIC1.93□□□□□ -2.1
VRK1Q99986 RNU6-888P-201ENST00000363010 101 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 RNU6-439P-201ENST00000384188 106 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 MIR221-201ENST00000385135 110 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VRK1Q99986 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 SNRPGP13-201ENST00000442212 177 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 Y_RNA.666-201ENST00000516187 112 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 RNU1-40P-201ENST00000516816 164 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 RNU1-97P-201ENST00000516872 164 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 SNORA77B-201ENST00000578179 125 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 MIR6132-201ENST00000622083 109 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 AC095038.3-201ENST00000634439 195 ntBASIC1.92□□□□□ -2.1
VRK1Q99986 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
VRK1Q99986 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
VRK1Q99986 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
VRK1Q99986 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
VRK1Q99986 AC131280.1-202ENST00000624067 4211 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 RNU6-449P-201ENST00000383914 107 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 Y_RNA.393-201ENST00000383936 102 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 SNORD61-201ENST00000384252 73 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 RNU6-804P-201ENST00000384286 107 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 SNORD38C-201ENST00000384381 69 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 MIR452-201ENST00000385020 85 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 MIR1267-201ENST00000408723 78 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 AC015922.2-201ENST00000435593 184 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 RNU6-830P-201ENST00000516353 107 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 MIR3646-201ENST00000578301 84 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 DNAJC19P2-201ENST00000593340 302 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 MIR6766-201ENST00000622641 72 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 MTND1P7-201ENST00000632801 297 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 AC021753.1-201ENST00000635724 168 ntBASIC1.91□□□□□ -2.1
VRK1Q99986 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.91□□□□□ -2.1
VRK1Q99986 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VRK1Q99986 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VRK1Q99986 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
VRK1Q99986 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
VRK1Q99986 RNU6-255P-201ENST00000516957 105 ntBASIC1.9□□□□□ -2.11
VRK1Q99986 SNORA44.1-201ENST00000517031 108 ntBASIC1.9□□□□□ -2.11
VRK1Q99986 AC090142.3-201ENST00000519012 385 ntBASIC1.9□□□□□ -2.11
VRK1Q99986 IGKV3-31-201ENST00000523109 329 ntBASIC1.9□□□□□ -2.11
VRK1Q99986 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.9□□□□□ -2.11
VRK1Q99986 Y_RNA.521-201ENST00000384560 114 ntBASIC1.89□□□□□ -2.11
VRK1Q99986 Y_RNA.542-201ENST00000384641 111 ntBASIC1.89□□□□□ -2.11
VRK1Q99986 MIR548A2-201ENST00000384956 97 ntBASIC1.89□□□□□ -2.11
VRK1Q99986 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
VRK1Q99986 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
VRK1Q99986 MIR548O-201ENST00000408583 114 ntBASIC1.89□□□□□ -2.11
VRK1Q99986 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.89□□□□□ -2.11
VRK1Q99986 AC093850.1-201ENST00000454121 251 ntBASIC1.89□□□□□ -2.11
VRK1Q99986 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
VRK1Q99986 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.89□□□□□ -2.11
VRK1Q99986 RNU6-693P-201ENST00000516134 107 ntBASIC1.89□□□□□ -2.11
VRK1Q99986 MIR4778-201ENST00000577635 80 ntBASIC1.89□□□□□ -2.11
VRK1Q99986 AL365205.2-201ENST00000594586 68 ntBASIC1.89□□□□□ -2.11
VRK1Q99986 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms