Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 U1.36-201ENST00000620684 176 ntBASIC2.05□□□□□ -2.08
SMOQ99835 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.05□□□□□ -2.08
SMOQ99835 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.05□□□□□ -2.08
SMOQ99835 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
SMOQ99835 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SMOQ99835 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SMOQ99835 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SMOQ99835 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.04□□□□□ -2.08
SMOQ99835 RNU6-151P-201ENST00000364158 107 ntBASIC2.04□□□□□ -2.08
SMOQ99835 Y_RNA.634-201ENST00000364811 113 ntBASIC2.04□□□□□ -2.08
SMOQ99835 Y_RNA.337-201ENST00000365312 102 ntBASIC2.04□□□□□ -2.08
SMOQ99835 Y_RNA.338-201ENST00000365320 114 ntBASIC2.04□□□□□ -2.08
SMOQ99835 RNU6-768P-201ENST00000384683 107 ntBASIC2.04□□□□□ -2.08
SMOQ99835 U8.13-201ENST00000390842 128 ntBASIC2.04□□□□□ -2.08
SMOQ99835 RNU2-7P-201ENST00000410794 178 ntBASIC2.04□□□□□ -2.08
SMOQ99835 SNORD116-25-201ENST00000516517 92 ntBASIC2.04□□□□□ -2.08
SMOQ99835 RNU7-28P-201ENST00000516759 62 ntBASIC2.04□□□□□ -2.08
SMOQ99835 AC097639.2-201ENST00000603159 172 ntBASIC2.04□□□□□ -2.08
SMOQ99835 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.04□□□□□ -2.08
SMOQ99835 MTND1P7-201ENST00000632801 297 ntBASIC2.04□□□□□ -2.08
SMOQ99835 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.03□□□□□ -2.08
SMOQ99835 RNA5SP276-201ENST00000362580 94 ntBASIC2.03□□□□□ -2.08
SMOQ99835 SNORA79-201ENST00000408376 140 ntBASIC2.03□□□□□ -2.08
SMOQ99835 RN7SKP200-201ENST00000410564 320 ntBASIC2.03□□□□□ -2.08
SMOQ99835 RNU2-70P-201ENST00000410718 179 ntBASIC2.03□□□□□ -2.08
SMOQ99835 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.03□□□□□ -2.08
SMOQ99835 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
SMOQ99835 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
SMOQ99835 RNU6-1116P-201ENST00000517269 99 ntBASIC2.03□□□□□ -2.08
SMOQ99835 AL160236.1-201ENST00000556317 195 ntBASIC2.03□□□□□ -2.08
SMOQ99835 MIR378D2-201ENST00000580636 98 ntBASIC2.03□□□□□ -2.08
SMOQ99835 DNAJC19P2-201ENST00000593340 302 ntBASIC2.03□□□□□ -2.08
SMOQ99835 Y_RNA.778-201ENST00000620203 90 ntBASIC2.03□□□□□ -2.08
SMOQ99835 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SMOQ99835 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMOQ99835 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SMOQ99835 MIRLET7C-201ENST00000362160 84 ntBASIC2.02□□□□□ -2.09
SMOQ99835 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.02□□□□□ -2.09
SMOQ99835 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
SMOQ99835 AL356379.1-201ENST00000414105 126 ntBASIC2.02□□□□□ -2.09
SMOQ99835 AC003989.2-201ENST00000440224 169 ntBASIC2.02□□□□□ -2.09
SMOQ99835 AC079804.2-201ENST00000490376 200 ntBASIC2.02□□□□□ -2.09
SMOQ99835 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
SMOQ99835 RNA5SP153-201ENST00000516498 76 ntBASIC2.02□□□□□ -2.09
SMOQ99835 SNORA31.17-201ENST00000516953 127 ntBASIC2.02□□□□□ -2.09
SMOQ99835 Y_RNA.714-201ENST00000517065 90 ntBASIC2.02□□□□□ -2.09
SMOQ99835 MIR4662B-201ENST00000579498 81 ntBASIC2.02□□□□□ -2.09
SMOQ99835 AC078899.2-201ENST00000595282 212 ntBASIC2.02□□□□□ -2.09
SMOQ99835 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SMOQ99835 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SMOQ99835 Y_RNA.4-201ENST00000362333 112 ntBASIC2.01□□□□□ -2.09
SMOQ99835 Y_RNA.66-201ENST00000362862 102 ntBASIC2.01□□□□□ -2.09
SMOQ99835 RNU6-978P-201ENST00000364371 103 ntBASIC2.01□□□□□ -2.09
SMOQ99835 RNU4-11P-201ENST00000365287 132 ntBASIC2.01□□□□□ -2.09
SMOQ99835 Y_RNA.400-201ENST00000383963 111 ntBASIC2.01□□□□□ -2.09
SMOQ99835 Y_RNA.521-201ENST00000384560 114 ntBASIC2.01□□□□□ -2.09
SMOQ99835 RNU6-1031P-201ENST00000384773 107 ntBASIC2.01□□□□□ -2.09
SMOQ99835 CYCSP49-201ENST00000420810 319 ntBASIC2.01□□□□□ -2.09
SMOQ99835 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
SMOQ99835 CALM2P4-201ENST00000430810 426 ntBASIC2.01□□□□□ -2.09
SMOQ99835 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
SMOQ99835 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.01□□□□□ -2.09
SMOQ99835 AC087685.1-201ENST00000587507 141 ntBASIC2.01□□□□□ -2.09
SMOQ99835 SNORA28-201ENST00000606769 126 ntBASIC2.01□□□□□ -2.09
SMOQ99835 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.01□□□□□ -2.09
SMOQ99835 RNU6-1084P-201ENST00000362498 107 ntBASIC2□□□□□ -2.09
SMOQ99835 RNA5SP37-201ENST00000365420 130 ntBASIC2□□□□□ -2.09
SMOQ99835 RNU6-1336P-201ENST00000383886 109 ntBASIC2□□□□□ -2.09
SMOQ99835 MIR17-201ENST00000385012 84 ntBASIC2□□□□□ -2.09
SMOQ99835 U8.16-201ENST00000391279 133 ntBASIC2□□□□□ -2.09
SMOQ99835 AC019129.1-201ENST00000403786 261 ntBASIC2□□□□□ -2.09
SMOQ99835 RNU4-61P-201ENST00000411243 107 ntBASIC2□□□□□ -2.09
SMOQ99835 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2□□□□□ -2.09
SMOQ99835 SNORD45.4-201ENST00000516629 73 ntBASIC2□□□□□ -2.09
SMOQ99835 AC120024.3-201ENST00000603167 156 ntBASIC2□□□□□ -2.09
SMOQ99835 AP000553.5-201ENST00000641933 54 ntBASIC2□□□□□ -2.09
SMOQ99835 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SMOQ99835 ICE2P2-201ENST00000483823 2787 ntBASIC1.99□□□□□ -2.09
SMOQ99835 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMOQ99835 Y_RNA.215-201ENST00000364204 112 ntBASIC1.99□□□□□ -2.09
SMOQ99835 snoU2-30.1-201ENST00000365012 70 ntBASIC1.99□□□□□ -2.09
SMOQ99835 Y_RNA.393-201ENST00000383936 102 ntBASIC1.99□□□□□ -2.09
SMOQ99835 RNU6-424P-201ENST00000384367 105 ntBASIC1.99□□□□□ -2.09
SMOQ99835 RNU6-950P-201ENST00000384651 107 ntBASIC1.99□□□□□ -2.09
SMOQ99835 AL034345.1-201ENST00000407768 123 ntBASIC1.99□□□□□ -2.09
SMOQ99835 AL445685.2-201ENST00000422551 342 ntBASIC1.99□□□□□ -2.09
SMOQ99835 snoU13.27-201ENST00000459278 104 ntBASIC1.99□□□□□ -2.09
SMOQ99835 RNU7-34P-201ENST00000459394 64 ntBASIC1.99□□□□□ -2.09
SMOQ99835 AC099513.1-201ENST00000490423 301 ntBASIC1.99□□□□□ -2.09
SMOQ99835 AC114811.1-201ENST00000507207 168 ntBASIC1.99□□□□□ -2.09
SMOQ99835 RNA5SP182-201ENST00000516064 82 ntBASIC1.99□□□□□ -2.09
SMOQ99835 Y_RNA.666-201ENST00000516187 112 ntBASIC1.99□□□□□ -2.09
SMOQ99835 RNU6-365P-201ENST00000517113 106 ntBASIC1.99□□□□□ -2.09
SMOQ99835 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.99□□□□□ -2.09
SMOQ99835 AC021506.2-201ENST00000612354 169 ntBASIC1.99□□□□□ -2.09
SMOQ99835 MIR6845-201ENST00000613182 61 ntBASIC1.99□□□□□ -2.09
SMOQ99835 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
SMOQ99835 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.99□□□□□ -2.09
SMOQ99835 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMOQ99835 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms