Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC093023.1-201ENST00000547375 507 ntBASIC-1.32□□□□□ -2.62
IFT140Q96RY7 MIR3165-201ENST00000579874 75 ntBASIC-1.32□□□□□ -2.62
IFT140Q96RY7 MIR4491-201ENST00000581087 68 ntBASIC-1.32□□□□□ -2.62
IFT140Q96RY7 MIR4324-201ENST00000584846 72 ntBASIC-1.32□□□□□ -2.62
IFT140Q96RY7 AL357078.3-201ENST00000607528 618 ntBASIC-1.32□□□□□ -2.62
IFT140Q96RY7 AL391262.2-201ENST00000622466 494 ntBASIC-1.32□□□□□ -2.62
IFT140Q96RY7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.33□□□□□ -2.62
IFT140Q96RY7 MIR410-201ENST00000362222 80 ntBASIC-1.33□□□□□ -2.62
IFT140Q96RY7 MTND2P18-201ENST00000419962 1030 ntBASIC-1.33□□□□□ -2.62
IFT140Q96RY7 AC108059.2-201ENST00000434626 151 ntBASIC-1.33□□□□□ -2.62
IFT140Q96RY7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.33□□□□□ -2.62
IFT140Q96RY7 SCARNA17-201ENST00000516183 144 ntBASIC-1.33□□□□□ -2.62
IFT140Q96RY7 RNU6-881P-201ENST00000516813 102 ntBASIC-1.33□□□□□ -2.62
IFT140Q96RY7 MIR378F-201ENST00000578143 78 ntBASIC-1.33□□□□□ -2.62
IFT140Q96RY7 AC109347.2-201ENST00000610220 349 ntBASIC-1.33□□□□□ -2.62
IFT140Q96RY7 AC112487.2-201ENST00000637950 304 ntBASIC-1.33□□□□□ -2.62
IFT140Q96RY7 AC006927.3-201ENST00000638789 384 ntBASIC-1.33□□□□□ -2.62
IFT140Q96RY7 AL596211.1-201ENST00000569873 2277 ntBASIC-1.33□□□□□ -2.62
IFT140Q96RY7 RNA5SP245-201ENST00000364239 121 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 RNU6-214P-201ENST00000384130 107 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 RNU6-195P-201ENST00000411352 109 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 MTATP6P17-201ENST00000431030 672 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 MTND4P7-201ENST00000523876 130 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 MIR3682-201ENST00000581338 84 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 AL133215.3-201ENST00000609801 448 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 HULC.1-201ENST00000612720 240 ntBASIC-1.34□□□□□ -2.62
IFT140Q96RY7 RNU6-455P-201ENST00000384681 107 ntBASIC-1.35□□□□□ -2.63
IFT140Q96RY7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.35□□□□□ -2.63
IFT140Q96RY7 MTCO2P16-201ENST00000436962 677 ntBASIC-1.35□□□□□ -2.63
IFT140Q96RY7 AL031667.1-201ENST00000440222 725 ntBASIC-1.35□□□□□ -2.63
IFT140Q96RY7 AC018714.1-201ENST00000605028 208 ntBASIC-1.35□□□□□ -2.63
IFT140Q96RY7 MIR3674-201ENST00000636576 68 ntBASIC-1.35□□□□□ -2.63
IFT140Q96RY7 SNORD114-3-201ENST00000364969 75 ntBASIC-1.36□□□□□ -2.63
IFT140Q96RY7 RNU6-767P-201ENST00000384132 107 ntBASIC-1.36□□□□□ -2.63
IFT140Q96RY7 RNU6-456P-201ENST00000384493 107 ntBASIC-1.36□□□□□ -2.63
IFT140Q96RY7 U8.15-201ENST00000390947 134 ntBASIC-1.36□□□□□ -2.63
IFT140Q96RY7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.36□□□□□ -2.63
IFT140Q96RY7 AC131281.1-201ENST00000522984 164 ntBASIC-1.36□□□□□ -2.63
IFT140Q96RY7 AP003168.1-201ENST00000530091 307 ntBASIC-1.36□□□□□ -2.63
IFT140Q96RY7 AC011458.1-201ENST00000604034 617 ntBASIC-1.36□□□□□ -2.63
IFT140Q96RY7 AC092807.2-201ENST00000609367 243 ntBASIC-1.36□□□□□ -2.63
IFT140Q96RY7 JPX_2.1-201ENST00000614161 69 ntBASIC-1.36□□□□□ -2.63
IFT140Q96RY7 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNU6-790P-201ENST00000384479 105 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 AL445193.1-201ENST00000441183 141 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNU7-180P-201ENST00000459240 63 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 AC024405.2-202ENST00000532731 184 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNU6-517P-201ENST00000384362 110 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNY3P9-201ENST00000384727 106 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNU6-437P-201ENST00000459408 95 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 MTCO2P30-201ENST00000503662 364 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 CCDC34P1-201ENST00000507441 517 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNU7-175P-201ENST00000515915 61 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNU6-189P-201ENST00000516120 101 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.37□□□□□ -2.63
IFT140Q96RY7 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.38□□□□□ -2.63
IFT140Q96RY7 SNORD114-25-201ENST00000363742 72 ntBASIC-1.38□□□□□ -2.63
IFT140Q96RY7 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.38□□□□□ -2.63
IFT140Q96RY7 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.38□□□□□ -2.63
IFT140Q96RY7 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.38□□□□□ -2.63
IFT140Q96RY7 RNU6-636P-201ENST00000384598 107 ntBASIC-1.38□□□□□ -2.63
IFT140Q96RY7 RNA5SP237-201ENST00000410414 113 ntBASIC-1.38□□□□□ -2.63
IFT140Q96RY7 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.38□□□□□ -2.63
IFT140Q96RY7 RNU7-53P-201ENST00000516705 60 ntBASIC-1.38□□□□□ -2.63
IFT140Q96RY7 SNORD115-34-201ENST00000362441 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-12-201ENST00000362583 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-29-201ENST00000362834 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-9-201ENST00000362912 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-21-201ENST00000362963 81 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-14-201ENST00000363090 81 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-13-201ENST00000363358 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-11-201ENST00000363616 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-5-201ENST00000363633 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-39-201ENST00000363694 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-4-201ENST00000363810 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-16-201ENST00000363887 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-6-201ENST00000363942 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-42-201ENST00000364273 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-15-201ENST00000364809 81 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-1-201ENST00000364961 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-26-201ENST00000365067 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-10-201ENST00000365073 81 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-43-201ENST00000365503 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 SNORD115-36-201ENST00000365629 82 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 RNU2-9P-201ENST00000410194 145 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.39□□□□□ -2.63
IFT140Q96RY7 MIR4423-201ENST00000580922 80 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 MIR4999-201ENST00000585029 91 ntBASIC-1.39□□□□□ -2.63
IFT140Q96RY7 MIR5692C1-201ENST00000585309 91 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms