Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 SNORD11-201ENST00000459124 84 ntBASIC1.68□□□□□ -2.14
CCDC138Q96M89 RNU6-250P-201ENST00000516958 103 ntBASIC1.68□□□□□ -2.14
CCDC138Q96M89 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC138Q96M89 FAM106DP-201ENST00000586416 501 ntBASIC1.68□□□□□ -2.14
CCDC138Q96M89 snoU13.31-201ENST00000607291 104 ntBASIC1.68□□□□□ -2.14
CCDC138Q96M89 GHRLOS.1-201ENST00000610995 70 ntBASIC1.68□□□□□ -2.14
CCDC138Q96M89 AC068700.1-201ENST00000565862 3754 ntBASIC1.68□□□□□ -2.14
CCDC138Q96M89 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC138Q96M89 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
CCDC138Q96M89 MIR526A1-201ENST00000384897 85 ntBASIC1.67□□□□□ -2.14
CCDC138Q96M89 RNU2-38P-201ENST00000410856 79 ntBASIC1.67□□□□□ -2.14
CCDC138Q96M89 SNORD2.1-201ENST00000458762 69 ntBASIC1.67□□□□□ -2.14
CCDC138Q96M89 RNU1-98P-201ENST00000458992 160 ntBASIC1.67□□□□□ -2.14
CCDC138Q96M89 Y_RNA.679-201ENST00000516416 91 ntBASIC1.67□□□□□ -2.14
CCDC138Q96M89 AC006006.1-201ENST00000603082 144 ntBASIC1.67□□□□□ -2.14
CCDC138Q96M89 U4.1-201ENST00000620349 87 ntBASIC1.67□□□□□ -2.14
CCDC138Q96M89 RNU6-442P-201ENST00000383968 104 ntBASIC1.66□□□□□ -2.14
CCDC138Q96M89 RNU6-196P-201ENST00000384315 107 ntBASIC1.66□□□□□ -2.14
CCDC138Q96M89 SNORA8.3-201ENST00000384679 139 ntBASIC1.66□□□□□ -2.14
CCDC138Q96M89 MIR136-201ENST00000385207 82 ntBASIC1.66□□□□□ -2.14
CCDC138Q96M89 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CCDC138Q96M89 SNORA26.9-201ENST00000391322 122 ntBASIC1.66□□□□□ -2.14
CCDC138Q96M89 AL603910.2-201ENST00000407268 136 ntBASIC1.66□□□□□ -2.14
CCDC138Q96M89 MIR548H3-201ENST00000408771 118 ntBASIC1.66□□□□□ -2.14
CCDC138Q96M89 RNU6-1132P-201ENST00000459214 107 ntBASIC1.66□□□□□ -2.14
CCDC138Q96M89 AC008507.4-201ENST00000585464 127 ntBASIC1.66□□□□□ -2.14
CCDC138Q96M89 AL162730.1-201ENST00000605734 292 ntBASIC1.66□□□□□ -2.14
CCDC138Q96M89 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
CCDC138Q96M89 RN7SKP101-201ENST00000411376 320 ntBASIC1.65□□□□□ -2.15
CCDC138Q96M89 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC138Q96M89 AC015922.2-201ENST00000435593 184 ntBASIC1.65□□□□□ -2.15
CCDC138Q96M89 Y_RNA.668-201ENST00000516233 93 ntBASIC1.65□□□□□ -2.15
CCDC138Q96M89 MIR4282-201ENST00000583613 67 ntBASIC1.65□□□□□ -2.15
CCDC138Q96M89 AL357312.1-201ENST00000603879 298 ntBASIC1.65□□□□□ -2.15
CCDC138Q96M89 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.65□□□□□ -2.15
CCDC138Q96M89 MIR378A-201ENST00000362177 66 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 Y_RNA.54-201ENST00000362766 105 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 Y_RNA.562-201ENST00000384695 113 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 SNORD41-201ENST00000386967 70 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 RNU6-651P-201ENST00000411040 105 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC138Q96M89 RN7SKP88-201ENST00000516847 250 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 AC090142.3-201ENST00000519012 385 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 MIR502-201ENST00000606349 86 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 AL021707.8-201ENST00000609428 183 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 7SK.8-201ENST00000612110 250 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 7SK.11-201ENST00000615477 250 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 uc_338.4-201ENST00000616635 176 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 7SK.13-201ENST00000622040 250 ntBASIC1.64□□□□□ -2.15
CCDC138Q96M89 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CCDC138Q96M89 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC138Q96M89 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC138Q96M89 Y_RNA.277-201ENST00000364754 102 ntBASIC1.63□□□□□ -2.15
CCDC138Q96M89 SNORD38C-201ENST00000384381 69 ntBASIC1.63□□□□□ -2.15
CCDC138Q96M89 MIR626-201ENST00000385032 94 ntBASIC1.63□□□□□ -2.15
CCDC138Q96M89 MIR15B-201ENST00000385045 98 ntBASIC1.63□□□□□ -2.15
CCDC138Q96M89 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC138Q96M89 CYP3A52P-201ENST00000563326 91 ntBASIC1.63□□□□□ -2.15
CCDC138Q96M89 MIR4503-201ENST00000582187 83 ntBASIC1.63□□□□□ -2.15
CCDC138Q96M89 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.63□□□□□ -2.15
CCDC138Q96M89 BX284668.6-201ENST00000606899 438 ntBASIC1.63□□□□□ -2.15
CCDC138Q96M89 AC062037.2-201ENST00000610137 73 ntBASIC1.63□□□□□ -2.15
CCDC138Q96M89 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC138Q96M89 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC138Q96M89 Y_RNA.24-201ENST00000362508 103 ntBASIC1.62□□□□□ -2.15
CCDC138Q96M89 RNU1-17P-201ENST00000363022 152 ntBASIC1.62□□□□□ -2.15
CCDC138Q96M89 Y_RNA.224-201ENST00000364308 111 ntBASIC1.62□□□□□ -2.15
CCDC138Q96M89 RNU4-10P-201ENST00000364383 140 ntBASIC1.62□□□□□ -2.15
CCDC138Q96M89 Y_RNA.416-201ENST00000384014 113 ntBASIC1.62□□□□□ -2.15
CCDC138Q96M89 MIR516B2-201ENST00000385190 85 ntBASIC1.62□□□□□ -2.15
CCDC138Q96M89 MIR8070-201ENST00000616510 88 ntBASIC1.62□□□□□ -2.15
CCDC138Q96M89 7SK.10-201ENST00000621414 298 ntBASIC1.62□□□□□ -2.15
CCDC138Q96M89 RNU6-702P-201ENST00000364982 107 ntBASIC1.61□□□□□ -2.15
CCDC138Q96M89 RNU6-463P-201ENST00000384340 107 ntBASIC1.61□□□□□ -2.15
CCDC138Q96M89 MIR613-201ENST00000385248 95 ntBASIC1.61□□□□□ -2.15
CCDC138Q96M89 SNORD72-201ENST00000390994 80 ntBASIC1.61□□□□□ -2.15
CCDC138Q96M89 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
CCDC138Q96M89 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC138Q96M89 AL049861.1-201ENST00000603130 150 ntBASIC1.61□□□□□ -2.15
CCDC138Q96M89 MIR8065-201ENST00000620577 100 ntBASIC1.61□□□□□ -2.15
CCDC138Q96M89 Y_RNA.193-201ENST00000363979 102 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 RNU6-268P-201ENST00000364174 107 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 Y_RNA.304-201ENST00000365011 112 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 Y_RNA.350-201ENST00000365409 98 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 Y_RNA.452-201ENST00000384202 108 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 RNU6-321P-201ENST00000410912 106 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 SNRPGP14-201ENST00000435400 219 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 SNORD13-201ENST00000459299 104 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC138Q96M89 TRMT112P2-201ENST00000512910 132 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 RNU7-149P-201ENST00000516739 59 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 AC100767.1-201ENST00000528178 123 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 MIR4643-201ENST00000577473 78 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 MIR3683-201ENST00000580847 82 ntBASIC1.6□□□□□ -2.15
CCDC138Q96M89 AL442644.1-201ENST00000454390 3105 ntBASIC1.59□□□□□ -2.15
CCDC138Q96M89 Y_RNA.144-201ENST00000363521 113 ntBASIC1.59□□□□□ -2.15
CCDC138Q96M89 RNA5SP190-201ENST00000365222 118 ntBASIC1.59□□□□□ -2.15
CCDC138Q96M89 Y_RNA.478-201ENST00000384358 107 ntBASIC1.59□□□□□ -2.15
CCDC138Q96M89 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 255.9 ms