Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 U8.7-201ENST00000364940 136 ntBASIC0.33□□□□□ -2.36
PKNOX2Q96KN3 SNORD81.2-201ENST00000365153 76 ntBASIC0.33□□□□□ -2.36
PKNOX2Q96KN3 MIR489-201ENST00000384923 84 ntBASIC0.33□□□□□ -2.36
PKNOX2Q96KN3 AC024067.1-201ENST00000426199 223 ntBASIC0.33□□□□□ -2.36
PKNOX2Q96KN3 AC008507.4-201ENST00000585464 127 ntBASIC0.33□□□□□ -2.36
PKNOX2Q96KN3 DEFB117-201ENST00000602356 141 ntBASIC0.33□□□□□ -2.36
PKNOX2Q96KN3 SNORD81.1-201ENST00000363064 77 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 Y_RNA.331-201ENST00000365267 102 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 MIR216A-201ENST00000385063 110 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 MIR559-201ENST00000385188 96 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 MTCO2P33-201ENST00000402100 465 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 AC096644.2-201ENST00000429278 159 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 RNU7-181P-201ENST00000517234 74 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 MIR2681-201ENST00000581814 105 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 VN1R91P-201ENST00000594377 169 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 MIR4791-201ENST00000607666 84 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 AC025253.1-201ENST00000613623 543 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 AC133104.2-201ENST00000615272 193 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 AC010205.1-201ENST00000616668 449 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 MIR548AY-201ENST00000617669 107 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 MTND1P7-201ENST00000632801 297 ntBASIC0.32□□□□□ -2.36
PKNOX2Q96KN3 SNORD45.3-201ENST00000363836 72 ntBASIC0.31□□□□□ -2.36
PKNOX2Q96KN3 SNORA1.2-201ENST00000365189 134 ntBASIC0.31□□□□□ -2.36
PKNOX2Q96KN3 Y_RNA.462-201ENST00000384268 102 ntBASIC0.31□□□□□ -2.36
PKNOX2Q96KN3 Y_RNA.474-201ENST00000384341 102 ntBASIC0.31□□□□□ -2.36
PKNOX2Q96KN3 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
PKNOX2Q96KN3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
PKNOX2Q96KN3 AC113139.1-201ENST00000605049 239 ntBASIC0.31□□□□□ -2.36
PKNOX2Q96KN3 MIR7111-201ENST00000619751 72 ntBASIC0.31□□□□□ -2.36
PKNOX2Q96KN3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 MT-TL1-201ENST00000386347 75 ntBASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 RNU2-13P-201ENST00000515909 113 ntBASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 SCARNA8-201ENST00000515924 131 ntBASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 RNA5SP436-201ENST00000516020 115 ntBASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 RNU6-496P-201ENST00000516145 99 ntBASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 RNU6-559P-201ENST00000516151 98 ntBASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 AP000753.3-201ENST00000604083 169 ntBASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 AC243829.6-201ENST00000612652 106 ntBASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 AC006441.5-201ENST00000612680 209 ntBASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 AC015726.2-201ENST00000620112 122 ntBASIC0.3□□□□□ -2.36
PKNOX2Q96KN3 Y_RNA.242-201ENST00000364473 110 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 RNU6-934P-201ENST00000365154 107 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 RNU4-45P-201ENST00000365469 141 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 RNU6-342P-201ENST00000384521 104 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 MIR520H-201ENST00000385126 88 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 RNU6-876P-201ENST00000391295 104 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 RNU6-847P-201ENST00000411115 108 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 snoU13.21-201ENST00000459368 105 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 RNU6-437P-201ENST00000459408 95 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 RNU6-977P-201ENST00000516411 103 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 RNU6-1007P-201ENST00000516586 107 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 RNU6-699P-201ENST00000517081 110 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 AC006600.1-201ENST00000572529 153 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 AL080274.1-201ENST00000605565 220 ntBASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.29□□□□□ -2.36
PKNOX2Q96KN3 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 MIR18A-201ENST00000362310 71 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 SNORD114-23-201ENST00000363536 72 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 RNU6-674P-201ENST00000363831 107 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 MIR520F-201ENST00000384824 87 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 RNU6-205P-201ENST00000390858 107 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 SNORD72-201ENST00000390994 80 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 MIR936-201ENST00000401264 98 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 AL603910.2-201ENST00000407268 136 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 RPL23AP91-201ENST00000569211 455 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 MIR4264-201ENST00000583520 66 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 Y_RNA.772-201ENST00000606692 102 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 AC011373.1-201ENST00000607270 237 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 uc_338.4-201ENST00000616635 176 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 MIR4272-201ENST00000635924 64 ntBASIC0.28□□□□□ -2.36
PKNOX2Q96KN3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
PKNOX2Q96KN3 RNU6-125P-201ENST00000384505 107 ntBASIC0.27□□□□□ -2.37
PKNOX2Q96KN3 RNY1P4-201ENST00000384595 115 ntBASIC0.27□□□□□ -2.37
PKNOX2Q96KN3 MIR1278-201ENST00000408753 81 ntBASIC0.27□□□□□ -2.37
PKNOX2Q96KN3 SNORA36B-201ENST00000410438 131 ntBASIC0.27□□□□□ -2.37
PKNOX2Q96KN3 SNORD83.1-201ENST00000411362 77 ntBASIC0.27□□□□□ -2.37
PKNOX2Q96KN3 MIR3612-201ENST00000579753 87 ntBASIC0.27□□□□□ -2.37
PKNOX2Q96KN3 RN7SL793P-201ENST00000583259 296 ntBASIC0.27□□□□□ -2.37
PKNOX2Q96KN3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 RNU6-1040P-201ENST00000383974 107 ntBASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 SNORD11-201ENST00000459124 84 ntBASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 RNU7-110P-201ENST00000516891 62 ntBASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 MIR4771-2-201ENST00000577758 74 ntBASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 MIR4711-201ENST00000578274 70 ntBASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 MIR3145-201ENST00000580727 82 ntBASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 MIR4804-201ENST00000581683 73 ntBASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 MIR4771-1-201ENST00000582617 74 ntBASIC0.26□□□□□ -2.37
PKNOX2Q96KN3 Y_RNA.112-201ENST00000363250 102 ntBASIC0.25□□□□□ -2.37
PKNOX2Q96KN3 RNU4-50P-201ENST00000364361 141 ntBASIC0.25□□□□□ -2.37
PKNOX2Q96KN3 Y_RNA.428-201ENST00000384078 102 ntBASIC0.25□□□□□ -2.37
PKNOX2Q96KN3 Y_RNA.458-201ENST00000384240 102 ntBASIC0.25□□□□□ -2.37
PKNOX2Q96KN3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 212 ms