Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 MIR300-201ENST00000401138 83 ntBASIC2.44□□□□□ -2.02
CHFRQ96EP1 SNORD23.1-201ENST00000408212 104 ntBASIC2.44□□□□□ -2.02
CHFRQ96EP1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.44□□□□□ -2.02
CHFRQ96EP1 RPL36AP48-201ENST00000485521 314 ntBASIC2.44□□□□□ -2.02
CHFRQ96EP1 NDUFA4P2-201ENST00000489989 244 ntBASIC2.44□□□□□ -2.02
CHFRQ96EP1 SCARNA15-202ENST00000516881 127 ntBASIC2.44□□□□□ -2.02
CHFRQ96EP1 MIR1273D-201ENST00000577266 86 ntBASIC2.44□□□□□ -2.02
CHFRQ96EP1 AC078899.2-201ENST00000595282 212 ntBASIC2.44□□□□□ -2.02
CHFRQ96EP1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.44□□□□□ -2.02
CHFRQ96EP1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.44□□□□□ -2.02
CHFRQ96EP1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CHFRQ96EP1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CHFRQ96EP1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHFRQ96EP1 Y_RNA.49-201ENST00000362714 112 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 Y_RNA.362-201ENST00000365518 110 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 RNU6-1292P-201ENST00000383856 107 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 RNU6-1113P-201ENST00000384348 107 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 MT-TI-201ENST00000387365 69 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 MTATP8P2-201ENST00000435212 202 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 AC023449.1-201ENST00000454464 154 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 RNU6-113P-201ENST00000516653 101 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 RNU6-1149P-201ENST00000516810 97 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CHFRQ96EP1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.43□□□□□ -2.02
CHFRQ96EP1 MIR4524B-201ENST00000581569 115 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.43□□□□□ -2.02
CHFRQ96EP1 MIR4753-201ENST00000585119 83 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 MIR376A2-201ENST00000636782 80 ntBASIC2.43□□□□□ -2.02
CHFRQ96EP1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.43□□□□□ -2.02
CHFRQ96EP1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.43□□□□□ -2.02
CHFRQ96EP1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHFRQ96EP1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.43□□□□□ -2.02
CHFRQ96EP1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CHFRQ96EP1 AL589743.1-201ENST00000551932 2712 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CHFRQ96EP1 RNY1P10-201ENST00000363268 113 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 RNU1-22P-201ENST00000363334 158 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 SNORD61-201ENST00000384252 73 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 MIR450A2-201ENST00000385022 100 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CHFRQ96EP1 SNORD78.1-201ENST00000390866 65 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 AL117342.1-201ENST00000404861 406 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 RPS12P2-201ENST00000439728 269 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 AC011604.1-201ENST00000545978 196 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 MIR5009-201ENST00000578736 100 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 MIR4662B-201ENST00000579498 81 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 MIR5092-201ENST00000583139 88 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.42□□□□□ -2.02
CHFRQ96EP1 AC006435.5-201ENST00000624486 112 ntBASIC2.42□□□□□ -2.02
CHFRQ96EP1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.42□□□□□ -2.02
CHFRQ96EP1 AC080100.1-201ENST00000624239 5356 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 Y_RNA.220-201ENST00000364244 109 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 RNU6-418P-201ENST00000384035 107 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 RNU6-820P-201ENST00000384273 107 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 MIR548A2-201ENST00000384956 97 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 SNORD77.3-201ENST00000391113 65 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 RPS3AP1-201ENST00000413190 320 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 AC097463.2-201ENST00000421074 142 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CHFRQ96EP1 RPS27P22-201ENST00000478056 241 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 MRPS17P9-201ENST00000511924 393 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 AC011406.1-201ENST00000512440 370 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 RNU6-830P-201ENST00000516353 107 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 RNU6-504P-201ENST00000516568 104 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 RNU6-158P-201ENST00000517104 100 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 MALAT1.1-201ENST00000618249 95 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 U4atac.1-201ENST00000618345 95 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 AC134878.1-201ENST00000619901 243 ntBASIC2.41□□□□□ -2.02
CHFRQ96EP1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.02
CHFRQ96EP1 MIR494-201ENST00000349529 81 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 Y_RNA.198-201ENST00000364013 98 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 RNA5SP181-201ENST00000410246 98 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 HMGN2P3-201ENST00000433603 273 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 HMGN2P5-201ENST00000436882 273 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.4□□□□□ -2.03
CHFRQ96EP1 AC097462.1-201ENST00000514125 324 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 RNU6-240P-201ENST00000516098 97 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 RNU6-904P-201ENST00000516206 101 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 RNU6-126P-201ENST00000516685 103 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 RNU6-1270P-201ENST00000517128 108 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 AC068339.1-201ENST00000526965 141 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 MIR3126-201ENST00000577443 74 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 AC007229.1-201ENST00000590455 412 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 SNORD115-40-201ENST00000606510 82 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 MIR6840-201ENST00000611937 71 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 Y_RNA.818-201ENST00000618813 71 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 U6.73-201ENST00000619194 103 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 AC025521.1-201ENST00000621624 286 ntBASIC2.4□□□□□ -2.03
CHFRQ96EP1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
CHFRQ96EP1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHFRQ96EP1 RNU6-888P-201ENST00000363010 101 ntBASIC2.39□□□□□ -2.03
CHFRQ96EP1 RNU6-944P-201ENST00000364023 107 ntBASIC2.39□□□□□ -2.03
CHFRQ96EP1 Y_RNA.219-201ENST00000364232 113 ntBASIC2.39□□□□□ -2.03
CHFRQ96EP1 RNU6-234P-201ENST00000365229 104 ntBASIC2.39□□□□□ -2.03
CHFRQ96EP1 Y_RNA.342-201ENST00000365352 113 ntBASIC2.39□□□□□ -2.03
CHFRQ96EP1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms