Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 Y_RNA.581-201ENST00000391017 97 ntBASIC0.89□□□□□ -2.27
VPS33AQ96AX1 Y_RNA.602-201ENST00000410535 92 ntBASIC0.89□□□□□ -2.27
VPS33AQ96AX1 Y_RNA.631-201ENST00000459607 101 ntBASIC0.89□□□□□ -2.27
VPS33AQ96AX1 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
VPS33AQ96AX1 RNU6-764P-201ENST00000516396 105 ntBASIC0.89□□□□□ -2.27
VPS33AQ96AX1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
VPS33AQ96AX1 SNORA1.2-201ENST00000365189 134 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 Y_RNA.389-201ENST00000383924 113 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 RNU6-102P-201ENST00000384485 104 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 SNORD28B-201ENST00000390993 75 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 U8.17-201ENST00000391292 132 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 MTCO2P33-201ENST00000402100 465 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 MIR1278-201ENST00000408753 81 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS33AQ96AX1 AC023449.1-201ENST00000454464 154 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.88□□□□□ -2.27
VPS33AQ96AX1 AC005840.1-201ENST00000498412 377 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS33AQ96AX1 AC023827.1-201ENST00000569247 97 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 AC104984.5-201ENST00000586878 94 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 AP000942.3-201ENST00000603702 160 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 AC106800.4-201ENST00000614905 153 ntBASIC0.88□□□□□ -2.27
VPS33AQ96AX1 RNU6-1205P-201ENST00000363625 106 ntBASIC0.87□□□□□ -2.27
VPS33AQ96AX1 Y_RNA.537-201ENST00000384626 109 ntBASIC0.87□□□□□ -2.27
VPS33AQ96AX1 RNU6-763P-201ENST00000390865 106 ntBASIC0.87□□□□□ -2.27
VPS33AQ96AX1 SNORD72-201ENST00000390994 80 ntBASIC0.87□□□□□ -2.27
VPS33AQ96AX1 AL603910.2-201ENST00000407268 136 ntBASIC0.87□□□□□ -2.27
VPS33AQ96AX1 SNORD111-201ENST00000408139 94 ntBASIC0.87□□□□□ -2.27
VPS33AQ96AX1 MIR1302-7-201ENST00000408841 72 ntBASIC0.87□□□□□ -2.27
VPS33AQ96AX1 MTCO1P5-201ENST00000433573 344 ntBASIC0.87□□□□□ -2.27
VPS33AQ96AX1 U7.7-201ENST00000459276 60 ntBASIC0.87□□□□□ -2.27
VPS33AQ96AX1 Y_RNA.128-201ENST00000363391 112 ntBASIC0.86□□□□□ -2.27
VPS33AQ96AX1 RNU6-450P-201ENST00000364654 107 ntBASIC0.86□□□□□ -2.27
VPS33AQ96AX1 RNU6-290P-201ENST00000365212 101 ntBASIC0.86□□□□□ -2.27
VPS33AQ96AX1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
VPS33AQ96AX1 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
VPS33AQ96AX1 MIR6715A-201ENST00000615929 79 ntBASIC0.86□□□□□ -2.27
VPS33AQ96AX1 AC015726.2-201ENST00000620112 122 ntBASIC0.86□□□□□ -2.27
VPS33AQ96AX1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
VPS33AQ96AX1 Y_RNA.276-201ENST00000364732 109 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 RNU6-474P-201ENST00000384243 107 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 SNORA51.10-201ENST00000384418 136 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 RNU6-613P-201ENST00000410412 108 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 AC092473.1-201ENST00000441098 221 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 SCARNA8-201ENST00000515924 131 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 MIR2115-201ENST00000516657 100 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 SNORA40.15-201ENST00000516884 107 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 AC036111.3-201ENST00000526389 112 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 AC025627.3-201ENST00000582078 182 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 AL512605.2-201ENST00000592972 256 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 AC037487.3-201ENST00000606668 112 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 AC013791.1-201ENST00000616619 62 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 AC134503.1-201ENST00000633048 54 ntBASIC0.85□□□□□ -2.27
VPS33AQ96AX1 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 RNA5SP496-201ENST00000391240 109 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 AC005534.2-201ENST00000431047 433 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS33AQ96AX1 AC067940.1-201ENST00000458411 300 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 COX6CP14-201ENST00000469580 174 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 MRPS35P2-201ENST00000508242 191 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 RNU4-57P-201ENST00000515980 135 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 AL353765.1-201ENST00000605514 183 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 AL021707.8-201ENST00000609428 183 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 AC022140.2-201ENST00000623500 188 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 MIR6516-201ENST00000630554 81 ntBASIC0.84□□□□□ -2.27
VPS33AQ96AX1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VPS33AQ96AX1 SNORD113.3-201ENST00000364630 78 ntBASIC0.83□□□□□ -2.28
VPS33AQ96AX1 RNU6-326P-201ENST00000365480 107 ntBASIC0.83□□□□□ -2.28
VPS33AQ96AX1 SNORA53-201ENST00000391141 249 ntBASIC0.83□□□□□ -2.28
VPS33AQ96AX1 AL035398.1-201ENST00000430869 322 ntBASIC0.83□□□□□ -2.28
VPS33AQ96AX1 RNU2-31P-201ENST00000516954 155 ntBASIC0.83□□□□□ -2.28
VPS33AQ96AX1 AL355297.3-201ENST00000604082 446 ntBASIC0.83□□□□□ -2.28
VPS33AQ96AX1 AL136317.1-201ENST00000612653 226 ntBASIC0.83□□□□□ -2.28
VPS33AQ96AX1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
VPS33AQ96AX1 MTND4P29-201ENST00000503122 1372 ntBASIC0.83□□□□□ -2.28
VPS33AQ96AX1 SNORA25.1-201ENST00000362326 128 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 RNU6-1272P-201ENST00000362776 107 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 Y_RNA.327-201ENST00000365201 102 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 RNU6-396P-201ENST00000365369 105 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 RNU6-514P-201ENST00000384208 107 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 RNU6-121P-201ENST00000410525 99 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 RNU6-847P-201ENST00000411115 108 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 Y_RNA.637-201ENST00000459424 114 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 AC113410.1-201ENST00000505029 247 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 RNA5SP458-201ENST00000516188 119 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 RNU7-181P-201ENST00000517234 74 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 AC091895.1-201ENST00000624494 256 ntBASIC0.82□□□□□ -2.28
VPS33AQ96AX1 Y_RNA.14-201ENST00000362415 103 ntBASIC0.81□□□□□ -2.28
VPS33AQ96AX1 Y_RNA.105-201ENST00000363182 111 ntBASIC0.81□□□□□ -2.28
VPS33AQ96AX1 Y_RNA.158-201ENST00000363651 101 ntBASIC0.81□□□□□ -2.28
VPS33AQ96AX1 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
VPS33AQ96AX1 RNU5E-4P-201ENST00000364931 120 ntBASIC0.81□□□□□ -2.28
VPS33AQ96AX1 Y_RNA.455-201ENST00000384230 98 ntBASIC0.81□□□□□ -2.28
VPS33AQ96AX1 Y_RNA.535-201ENST00000384612 99 ntBASIC0.81□□□□□ -2.28
VPS33AQ96AX1 RNU6-994P-201ENST00000410507 111 ntBASIC0.81□□□□□ -2.28
VPS33AQ96AX1 RNU2-13P-201ENST00000515909 113 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 321 ms