Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 RNA5SP432-201ENST00000362480 116 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.292-201ENST00000364904 97 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.401-201ENST00000383965 117 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 MIR653-201ENST00000385279 96 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 RNU6-482P-201ENST00000391068 107 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 AL451046.2-201ENST00000403074 277 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 MIR1298-201ENST00000408783 112 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.618-201ENST00000410949 107 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 RPS27P16-201ENST00000425758 201 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 RNU6-917P-201ENST00000516294 104 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.680-201ENST00000516441 93 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 RNU6-922P-201ENST00000516753 99 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 RNU6-902P-201ENST00000517212 91 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 AC090049.2-201ENST00000550377 109 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 FAM106DP-201ENST00000586416 501 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 AL049861.1-201ENST00000603130 150 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 uc_338.4-201ENST00000616635 176 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 AL353997.5-201ENST00000618886 171 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 AL121890.5-201ENST00000620848 304 ntBASIC1.51□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.229-201ENST00000364347 113 ntBASIC1.5□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.262-201ENST00000364641 102 ntBASIC1.5□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.269-201ENST00000364685 89 ntBASIC1.5□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.539-201ENST00000384635 107 ntBASIC1.5□□□□□ -2.17
RAB40AQ8WXH6 MIR526A1-201ENST00000384897 85 ntBASIC1.5□□□□□ -2.17
RAB40AQ8WXH6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.5□□□□□ -2.17
RAB40AQ8WXH6 CYCSP49-201ENST00000420810 319 ntBASIC1.5□□□□□ -2.17
RAB40AQ8WXH6 AC003989.2-201ENST00000440224 169 ntBASIC1.5□□□□□ -2.17
RAB40AQ8WXH6 AL513534.2-201ENST00000603836 250 ntBASIC1.5□□□□□ -2.17
RAB40AQ8WXH6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
RAB40AQ8WXH6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 RNU4-17P-201ENST00000365598 141 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 SNORD38C-201ENST00000384381 69 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.489-201ENST00000384410 101 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.572-201ENST00000384757 98 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 MIR9-3-201ENST00000385084 90 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 MIR516B2-201ENST00000385190 85 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 SNORD72-201ENST00000390994 80 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 AC015922.2-201ENST00000435593 184 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 RPL30P7-201ENST00000479312 323 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 AC090142.3-201ENST00000519012 385 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 AC084768.2-201ENST00000622736 221 ntBASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RAB40AQ8WXH6 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
RAB40AQ8WXH6 MIR15B-201ENST00000385045 98 ntBASIC1.48□□□□□ -2.17
RAB40AQ8WXH6 MIR136-201ENST00000385207 82 ntBASIC1.48□□□□□ -2.17
RAB40AQ8WXH6 SNORD58.1-201ENST00000391313 66 ntBASIC1.48□□□□□ -2.17
RAB40AQ8WXH6 RNU4-71P-201ENST00000516258 113 ntBASIC1.48□□□□□ -2.17
RAB40AQ8WXH6 SNORA25.15-201ENST00000516487 89 ntBASIC1.48□□□□□ -2.17
RAB40AQ8WXH6 RNU6-250P-201ENST00000516958 103 ntBASIC1.48□□□□□ -2.17
RAB40AQ8WXH6 AP001485.1-201ENST00000604799 199 ntBASIC1.48□□□□□ -2.17
RAB40AQ8WXH6 RNU6-653P-201ENST00000363074 106 ntBASIC1.47□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.188-201ENST00000363952 111 ntBASIC1.47□□□□□ -2.17
RAB40AQ8WXH6 Y_RNA.587-201ENST00000391210 103 ntBASIC1.47□□□□□ -2.17
RAB40AQ8WXH6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.47□□□□□ -2.17
RAB40AQ8WXH6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.47□□□□□ -2.17
RAB40AQ8WXH6 RNU7-149P-201ENST00000516739 59 ntBASIC1.47□□□□□ -2.17
RAB40AQ8WXH6 RNU6-111P-201ENST00000517179 105 ntBASIC1.47□□□□□ -2.17
RAB40AQ8WXH6 AL512310.8-201ENST00000550183 120 ntBASIC1.47□□□□□ -2.17
RAB40AQ8WXH6 MIR4662B-201ENST00000579498 81 ntBASIC1.47□□□□□ -2.17
RAB40AQ8WXH6 AC011921.3-201ENST00000605540 361 ntBASIC1.47□□□□□ -2.17
RAB40AQ8WXH6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.47□□□□□ -2.17
RAB40AQ8WXH6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 RNA5SP99-201ENST00000364020 114 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 RNY4P28-201ENST00000365281 93 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 RNU6-1138P-201ENST00000365359 106 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 SNORD41-201ENST00000386967 70 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 AC245047.8-201ENST00000456455 284 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 SNORD77.4-201ENST00000516158 81 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 RNU6-970P-201ENST00000516312 107 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 RNU6-1271P-201ENST00000517049 105 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 AL357312.1-201ENST00000603879 298 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 MIR502-201ENST00000606349 86 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.46□□□□□ -2.18
RAB40AQ8WXH6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 RNU1-17P-201ENST00000363022 152 ntBASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 RNU6-268P-201ENST00000364174 107 ntBASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 MIR616-201ENST00000385293 97 ntBASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 RPS29P11-201ENST00000496507 171 ntBASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 RN7SKP164-201ENST00000516138 266 ntBASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 MIR3664-201ENST00000579074 99 ntBASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 MIR3683-201ENST00000580847 82 ntBASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 AL391903.3-201ENST00000612158 163 ntBASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 Pinc.1-201ENST00000616452 154 ntBASIC1.45□□□□□ -2.18
RAB40AQ8WXH6 snoU2_19.4-201ENST00000364329 80 ntBASIC1.44□□□□□ -2.18
RAB40AQ8WXH6 RNY3P5-201ENST00000384127 102 ntBASIC1.44□□□□□ -2.18
RAB40AQ8WXH6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
RAB40AQ8WXH6 RNU6-381P-201ENST00000391259 108 ntBASIC1.44□□□□□ -2.18
RAB40AQ8WXH6 AL627390.1-201ENST00000396055 340 ntBASIC1.44□□□□□ -2.18
RAB40AQ8WXH6 SNRPGP14-201ENST00000435400 219 ntBASIC1.44□□□□□ -2.18
RAB40AQ8WXH6 COX6CP14-201ENST00000469580 174 ntBASIC1.44□□□□□ -2.18
RAB40AQ8WXH6 RNU6-126P-201ENST00000516685 103 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms