Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNU4-71P-201ENST00000516258 113 ntBASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-1007P-201ENST00000516586 107 ntBASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 MIR8063-201ENST00000621930 81 ntBASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 AL442644.1-201ENST00000454390 3105 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 SNORD33-201ENST00000362761 85 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.242-201ENST00000364473 110 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.489-201ENST00000384410 101 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 MIR626-201ENST00000385032 94 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 MIR891A-201ENST00000401237 79 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 MIR1278-201ENST00000408753 81 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 HMGN2P32-201ENST00000444648 269 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 RNU7-12P-201ENST00000516030 62 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 RPL23AP91-201ENST00000569211 455 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 MIR4422-201ENST00000581938 83 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 AC006006.1-201ENST00000603082 144 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 AL365265.1-201ENST00000621045 234 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
SLC44A1Q8WWI5 MIR378A-201ENST00000362177 66 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-199P-201ENST00000362954 107 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-653P-201ENST00000363074 106 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.292-201ENST00000364904 97 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 SNORD1A-201ENST00000364968 72 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 snoU2-30.1-201ENST00000365012 70 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 RNY4P28-201ENST00000365281 93 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.336-201ENST00000365307 109 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-163P-201ENST00000384396 106 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-383P-201ENST00000410864 94 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 BTF3P4-201ENST00000418852 495 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 AL354695.1-201ENST00000427935 228 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 AC245517.4-201ENST00000448601 281 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 AC114811.1-201ENST00000507207 168 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 SNORD116-28-201ENST00000516123 91 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 SNORD45.4-201ENST00000516629 73 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 AP000942.4-201ENST00000604811 241 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.188-201ENST00000363952 111 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.238-201ENST00000364441 102 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.262-201ENST00000364641 102 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.269-201ENST00000364685 89 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 SNORD50B-201ENST00000364995 70 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 SNORA67.5-201ENST00000391036 107 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 RNU1-78P-201ENST00000391248 165 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 MLLT10P1-201ENST00000418346 262 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-1053P-201ENST00000515930 101 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-1116P-201ENST00000517269 99 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 SUMO2P16-201ENST00000519475 264 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 MIR4498-201ENST00000577599 66 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 MIR4778-201ENST00000577635 80 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 AC008507.4-201ENST00000585464 127 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 AP001485.1-201ENST00000604799 199 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.43□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.164-201ENST00000363709 102 ntBASIC1.42□□□□□ -2.18
SLC44A1Q8WWI5 RNA5SP259-201ENST00000365541 109 ntBASIC1.42□□□□□ -2.18
SLC44A1Q8WWI5 MIR653-201ENST00000385279 96 ntBASIC1.42□□□□□ -2.18
SLC44A1Q8WWI5 PIGPP3-201ENST00000425307 415 ntBASIC1.42□□□□□ -2.18
SLC44A1Q8WWI5 AC027119.1-201ENST00000440877 241 ntBASIC1.42□□□□□ -2.18
SLC44A1Q8WWI5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.42□□□□□ -2.18
SLC44A1Q8WWI5 AC023449.1-201ENST00000454464 154 ntBASIC1.42□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-111P-201ENST00000517179 105 ntBASIC1.42□□□□□ -2.18
SLC44A1Q8WWI5 AL645939.4-201ENST00000604495 135 ntBASIC1.42□□□□□ -2.18
SLC44A1Q8WWI5 uc_338.4-201ENST00000616635 176 ntBASIC1.42□□□□□ -2.18
SLC44A1Q8WWI5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SLC44A1Q8WWI5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-1084P-201ENST00000362498 107 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.24-201ENST00000362508 103 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 U8.1-201ENST00000362843 134 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.65-201ENST00000362846 100 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 SNORD14E-201ENST00000364009 85 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.229-201ENST00000364347 113 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 RNU4-10P-201ENST00000364383 140 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-1138P-201ENST00000365359 106 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 RNU4-17P-201ENST00000365598 141 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 RNY3P5-201ENST00000384127 102 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 MIR452-201ENST00000385020 85 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 RNA5SP247-201ENST00000411181 105 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 AC079140.2-201ENST00000506193 142 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 RNA5SP445-201ENST00000515889 115 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 RNU6-1271P-201ENST00000517049 105 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 SNORD53B-201ENST00000577887 78 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 AL391903.3-201ENST00000612158 163 ntBASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.4-201ENST00000362333 112 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 SNORA2.2-201ENST00000365473 135 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 RNU6-442P-201ENST00000383968 104 ntBASIC1.4□□□□□ -2.19
SLC44A1Q8WWI5 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms