Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGB4Q8WW32 AL359821.1-201ENST00000605519 182 ntBASIC1.71□□□□□ -2.14
HMGB4Q8WW32 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGB4Q8WW32 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HMGB4Q8WW32 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMGB4Q8WW32 Y_RNA.24-201ENST00000362508 103 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 RNU6-653P-201ENST00000363074 106 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 RNY1-201ENST00000364228 113 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 Y_RNA.572-201ENST00000384757 98 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 MIR1287-201ENST00000408492 90 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 PIGPP3-201ENST00000425307 415 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGB4Q8WW32 HSPE1P24-201ENST00000450782 238 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 AC005840.1-201ENST00000498412 377 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.7□□□□□ -2.14
HMGB4Q8WW32 TRMT112P2-201ENST00000512910 132 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 RNU4-71P-201ENST00000516258 113 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 SNORD45.4-201ENST00000516629 73 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 DNAJC19P9-201ENST00000555084 351 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 AC087685.1-201ENST00000587507 141 ntBASIC1.7□□□□□ -2.14
HMGB4Q8WW32 RNU6-1084P-201ENST00000362498 107 ntBASIC1.69□□□□□ -2.14
HMGB4Q8WW32 Y_RNA.262-201ENST00000364641 102 ntBASIC1.69□□□□□ -2.14
HMGB4Q8WW32 RNA5SP259-201ENST00000365541 109 ntBASIC1.69□□□□□ -2.14
HMGB4Q8WW32 MIR891A-201ENST00000401237 79 ntBASIC1.69□□□□□ -2.14
HMGB4Q8WW32 MIR934-201ENST00000401241 83 ntBASIC1.69□□□□□ -2.14
HMGB4Q8WW32 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGB4Q8WW32 AC093850.1-201ENST00000454121 251 ntBASIC1.69□□□□□ -2.14
HMGB4Q8WW32 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGB4Q8WW32 MIR4255-201ENST00000579351 72 ntBASIC1.69□□□□□ -2.14
HMGB4Q8WW32 AL512598.1-201ENST00000610158 273 ntBASIC1.69□□□□□ -2.14
HMGB4Q8WW32 MIR8063-201ENST00000621930 81 ntBASIC1.69□□□□□ -2.14
HMGB4Q8WW32 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.69□□□□□ -2.14
HMGB4Q8WW32 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGB4Q8WW32 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HMGB4Q8WW32 RNU6-379P-201ENST00000363813 104 ntBASIC1.68□□□□□ -2.14
HMGB4Q8WW32 SNORD1A-201ENST00000364968 72 ntBASIC1.68□□□□□ -2.14
HMGB4Q8WW32 snoU2-30.1-201ENST00000365012 70 ntBASIC1.68□□□□□ -2.14
HMGB4Q8WW32 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGB4Q8WW32 COX6CP14-201ENST00000469580 174 ntBASIC1.68□□□□□ -2.14
HMGB4Q8WW32 SNORD53B-201ENST00000577887 78 ntBASIC1.68□□□□□ -2.14
HMGB4Q8WW32 MIR3618-201ENST00000580330 88 ntBASIC1.68□□□□□ -2.14
HMGB4Q8WW32 AC008507.4-201ENST00000585464 127 ntBASIC1.68□□□□□ -2.14
HMGB4Q8WW32 RNU6-199P-201ENST00000362954 107 ntBASIC1.67□□□□□ -2.14
HMGB4Q8WW32 Y_RNA.229-201ENST00000364347 113 ntBASIC1.67□□□□□ -2.14
HMGB4Q8WW32 RNU7-95P-201ENST00000459222 64 ntBASIC1.67□□□□□ -2.14
HMGB4Q8WW32 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGB4Q8WW32 RNY1P10-201ENST00000363268 113 ntBASIC1.66□□□□□ -2.14
HMGB4Q8WW32 snoU2_19.4-201ENST00000364329 80 ntBASIC1.66□□□□□ -2.14
HMGB4Q8WW32 RN7SKP51-201ENST00000410781 304 ntBASIC1.66□□□□□ -2.14
HMGB4Q8WW32 Y_RNA.626-201ENST00000411288 95 ntBASIC1.66□□□□□ -2.14
HMGB4Q8WW32 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGB4Q8WW32 RNU6-1007P-201ENST00000516586 107 ntBASIC1.66□□□□□ -2.14
HMGB4Q8WW32 AL049861.1-201ENST00000603130 150 ntBASIC1.66□□□□□ -2.14
HMGB4Q8WW32 uc_338.4-201ENST00000616635 176 ntBASIC1.66□□□□□ -2.14
HMGB4Q8WW32 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMGB4Q8WW32 AC106754.2-201ENST00000623006 233 ntBASIC1.66□□□□□ -2.14
HMGB4Q8WW32 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMGB4Q8WW32 WWP1P1-201ENST00000466609 2769 ntBASIC1.65□□□□□ -2.14
HMGB4Q8WW32 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 Y_RNA.336-201ENST00000365307 109 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 RNU4-17P-201ENST00000365598 141 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 Y_RNA.476-201ENST00000384347 108 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 SNORD72-201ENST00000390994 80 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 RNU1-78P-201ENST00000391248 165 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 RNU6-381P-201ENST00000391259 108 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 HMGN2P32-201ENST00000444648 269 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 AC023449.1-201ENST00000454464 154 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 AC079140.2-201ENST00000506193 142 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGB4Q8WW32 MIR4422-201ENST00000581938 83 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 AC009779.6-201ENST00000603972 165 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 AL645939.4-201ENST00000604495 135 ntBASIC1.65□□□□□ -2.15
HMGB4Q8WW32 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
HMGB4Q8WW32 SNORD33-201ENST00000362761 85 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 SNORD14E-201ENST00000364009 85 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 MIR526A1-201ENST00000384897 85 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 MIR653-201ENST00000385279 96 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 MIR1298-201ENST00000408783 112 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 RPL31P63-201ENST00000422565 375 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 AC027119.1-201ENST00000440877 241 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 AC245047.8-201ENST00000456455 284 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 AC092991.1-201ENST00000477176 376 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.64□□□□□ -2.15
HMGB4Q8WW32 RNY3P16-201ENST00000516338 101 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 CBX3P4-201ENST00000538909 354 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 BX248123.2-201ENST00000606318 124 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 AL365434.2-201ENST00000607979 234 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 MIR8070-201ENST00000616510 88 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 AC141273.2-201ENST00000618989 130 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 AL442644.1-201ENST00000454390 3105 ntBASIC1.64□□□□□ -2.15
HMGB4Q8WW32 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
HMGB4Q8WW32 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMGB4Q8WW32 Y_RNA.308-201ENST00000365043 101 ntBASIC1.63□□□□□ -2.15
HMGB4Q8WW32 MIR452-201ENST00000385020 85 ntBASIC1.63□□□□□ -2.15
HMGB4Q8WW32 MIR616-201ENST00000385293 97 ntBASIC1.63□□□□□ -2.15
HMGB4Q8WW32 SNRPGP14-201ENST00000435400 219 ntBASIC1.63□□□□□ -2.15
HMGB4Q8WW32 AC009474.2-201ENST00000451383 136 ntBASIC1.63□□□□□ -2.15
HMGB4Q8WW32 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGB4Q8WW32 SCARNA8-201ENST00000515924 131 ntBASIC1.63□□□□□ -2.15
HMGB4Q8WW32 SNORD77.4-201ENST00000516158 81 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms