Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 RNU6-47P-201ENST00000383866 107 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 RN7SKP200-201ENST00000410564 320 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 PIGPP3-201ENST00000425307 415 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 AL606517.2-201ENST00000442855 241 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.53□□□□□ -2.16
TRIM58Q8NG06 snoU13.9-201ENST00000458927 103 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 HMGN1P7-201ENST00000491722 313 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 Y_RNA.797-201ENST00000515977 94 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 RN7SKP164-201ENST00000516138 266 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 RNA5SP458-201ENST00000516188 119 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 RNU7-28P-201ENST00000516759 62 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM58Q8NG06 AC072026.1-201ENST00000605023 201 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 RNU2-4P-201ENST00000606190 192 ntBASIC1.53□□□□□ -2.16
TRIM58Q8NG06 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
TRIM58Q8NG06 SNORD68-201ENST00000363214 84 ntBASIC1.52□□□□□ -2.17
TRIM58Q8NG06 RNU6-1209P-201ENST00000363655 107 ntBASIC1.52□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.571-201ENST00000384753 98 ntBASIC1.52□□□□□ -2.17
TRIM58Q8NG06 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRIM58Q8NG06 RNU6-918P-201ENST00000391219 106 ntBASIC1.52□□□□□ -2.17
TRIM58Q8NG06 RNU2-64P-201ENST00000411315 191 ntBASIC1.52□□□□□ -2.17
TRIM58Q8NG06 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.52□□□□□ -2.17
TRIM58Q8NG06 RPS27P1-201ENST00000450552 247 ntBASIC1.52□□□□□ -2.17
TRIM58Q8NG06 AC245047.8-201ENST00000456455 284 ntBASIC1.52□□□□□ -2.17
TRIM58Q8NG06 RNA5SP481-201ENST00000516814 122 ntBASIC1.52□□□□□ -2.17
TRIM58Q8NG06 MIR4308-201ENST00000580634 81 ntBASIC1.52□□□□□ -2.17
TRIM58Q8NG06 MIR3683-201ENST00000580847 82 ntBASIC1.52□□□□□ -2.17
TRIM58Q8NG06 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM58Q8NG06 SNORA28-201ENST00000606769 126 ntBASIC1.52□□□□□ -2.17
TRIM58Q8NG06 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
TRIM58Q8NG06 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.51□□□□□ -2.17
TRIM58Q8NG06 RNU6-103P-201ENST00000363686 107 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 snoU2_19.4-201ENST00000364329 80 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.229-201ENST00000364347 113 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 SNORA63D-201ENST00000364359 132 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.270-201ENST00000364693 104 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 MIR616-201ENST00000385293 97 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 MT-TT-201ENST00000387460 66 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.587-201ENST00000391210 103 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 RNU6-381P-201ENST00000391259 108 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 RNA5SP482-201ENST00000391269 118 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 MIR1267-201ENST00000408723 78 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 SNRPGP10-201ENST00000432323 225 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 RNU6-453P-201ENST00000516819 85 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 AC022559.1-201ENST00000520905 205 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
TRIM58Q8NG06 MIR4744-201ENST00000581563 82 ntBASIC1.51□□□□□ -2.17
TRIM58Q8NG06 RNU6-1084P-201ENST00000362498 107 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 U8.1-201ENST00000362843 134 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.121-201ENST00000363309 113 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.182-201ENST00000363880 111 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.796-201ENST00000364268 102 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.233-201ENST00000364407 101 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.253-201ENST00000364562 112 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.799-201ENST00000364992 102 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 RNA5SP190-201ENST00000365222 118 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 RNU6-296P-201ENST00000384608 107 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 RNU6-1228P-201ENST00000391014 107 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 SNORA67.5-201ENST00000391036 107 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 AL606845.1-201ENST00000404881 255 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 AL034345.1-201ENST00000407768 123 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 RNU7-120P-201ENST00000459334 63 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 SCARNA8-201ENST00000515924 131 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 AL049861.1-201ENST00000603130 150 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 AC098479.1-201ENST00000609225 154 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 AL591926.4-201ENST00000616895 298 ntBASIC1.5□□□□□ -2.17
TRIM58Q8NG06 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM58Q8NG06 SNORA4.2-201ENST00000365313 147 ntBASIC1.49□□□□□ -2.17
TRIM58Q8NG06 RNY3P5-201ENST00000384127 102 ntBASIC1.49□□□□□ -2.17
TRIM58Q8NG06 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
TRIM58Q8NG06 RNU6-131P-201ENST00000391144 107 ntBASIC1.49□□□□□ -2.17
TRIM58Q8NG06 HSPE1P9-201ENST00000440046 311 ntBASIC1.49□□□□□ -2.17
TRIM58Q8NG06 STAG3L5P-204ENST00000443759 179 ntBASIC1.49□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.662-201ENST00000516028 97 ntBASIC1.49□□□□□ -2.17
TRIM58Q8NG06 RNU6-861P-201ENST00000516745 106 ntBASIC1.49□□□□□ -2.17
TRIM58Q8NG06 AL391903.3-201ENST00000612158 163 ntBASIC1.49□□□□□ -2.17
TRIM58Q8NG06 uc_338.4-201ENST00000616635 176 ntBASIC1.49□□□□□ -2.17
TRIM58Q8NG06 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.435-201ENST00000384095 112 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 SNORA12.1-201ENST00000390873 148 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 RNU6-360P-201ENST00000390944 104 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 RNU6-578P-201ENST00000390980 103 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 RPL30P13-201ENST00000418873 348 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 SNRPGP13-201ENST00000442212 177 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 AC245517.4-201ENST00000448601 281 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 AL121914.1-201ENST00000450188 156 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 snoU13.27-201ENST00000459278 104 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 RNU7-34P-201ENST00000459394 64 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 Y_RNA.676-201ENST00000516393 96 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 SNORA31.10-201ENST00000516482 106 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 RNA5SP437-201ENST00000517249 129 ntBASIC1.48□□□□□ -2.17
TRIM58Q8NG06 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.48□□□□□ -2.17
TRIM58Q8NG06 MIR4709-201ENST00000577272 72 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 450.4 ms