Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AL021707.8-201ENST00000609428 183 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 MIR6078-201ENST00000611069 100 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 AC006441.5-201ENST00000612680 209 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 RN7SL853P-201ENST00000617250 223 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 AC008133.2-201ENST00000624540 351 ntBASIC0.89□□□□□ -2.27
CCDC197Q8NCU1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 MIR802-201ENST00000390235 94 ntBASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 SNORA53-201ENST00000391141 249 ntBASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 BTF3P4-201ENST00000418852 495 ntBASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 AC091959.1-201ENST00000495857 238 ntBASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 RNU6-1143P-201ENST00000516125 104 ntBASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 RNU6-1007P-201ENST00000516586 107 ntBASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 AL356055.1-201ENST00000602528 446 ntBASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 Pinc.1-201ENST00000616452 154 ntBASIC0.88□□□□□ -2.27
CCDC197Q8NCU1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 SNORA25.1-201ENST00000362326 128 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.64-201ENST00000362845 102 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 RNU1-17P-201ENST00000363022 152 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 SNORA7.1-201ENST00000363750 139 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.202-201ENST00000364083 110 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.242-201ENST00000364473 110 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 SNORA33.2-201ENST00000365413 134 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 AL591806.2-201ENST00000433122 173 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 AP003733.2-201ENST00000529409 171 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 MIR5692C2-201ENST00000577959 77 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 AL512605.2-201ENST00000592972 256 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 SEPT14P17-201ENST00000617978 177 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 AL353997.5-201ENST00000618886 171 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 AC022140.2-201ENST00000623500 188 ntBASIC0.87□□□□□ -2.27
CCDC197Q8NCU1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.16-201ENST00000362421 102 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.152-201ENST00000363578 100 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.217-201ENST00000364214 105 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 MIR1302-7-201ENST00000408841 72 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 RNU6-985P-201ENST00000410182 104 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 RNU6-383P-201ENST00000410864 94 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 BTF3P11-201ENST00000426582 477 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 AL392103.1-201ENST00000447000 198 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.641-201ENST00000459414 105 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 MIR4661-201ENST00000582720 75 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 MIR4781-201ENST00000585250 76 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 AC037487.3-201ENST00000606668 112 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 AL353770.2-201ENST00000620024 78 ntBASIC0.86□□□□□ -2.27
CCDC197Q8NCU1 RNU6-514P-201ENST00000384208 107 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 RNU6-662P-201ENST00000384253 104 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 U8.17-201ENST00000391292 132 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 POLR2J4-204ENST00000418424 324 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 AL731563.1-201ENST00000442202 214 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 AC087343.1-201ENST00000477341 475 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 RNU4-57P-201ENST00000515980 135 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 SNORA27.4-201ENST00000516650 95 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 AP000942.3-201ENST00000603702 160 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 AC015726.2-201ENST00000620112 122 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 MIR4251-201ENST00000635819 61 ntBASIC0.85□□□□□ -2.27
CCDC197Q8NCU1 UBE2WP1-201ENST00000362030 340 ntBASIC0.84□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.84-201ENST00000363011 104 ntBASIC0.84□□□□□ -2.27
CCDC197Q8NCU1 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
CCDC197Q8NCU1 Y_RNA.330-201ENST00000365230 109 ntBASIC0.84□□□□□ -2.27
CCDC197Q8NCU1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC197Q8NCU1 MTND5P22-201ENST00000458380 195 ntBASIC0.84□□□□□ -2.27
CCDC197Q8NCU1 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
CCDC197Q8NCU1 RNU11-2P-201ENST00000516898 142 ntBASIC0.84□□□□□ -2.27
CCDC197Q8NCU1 AL008718.3-201ENST00000610217 321 ntBASIC0.84□□□□□ -2.27
CCDC197Q8NCU1 RNU6-1227P-201ENST00000383981 107 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 RNA5SP496-201ENST00000391240 109 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 MIR942-201ENST00000401111 86 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 AC005840.1-201ENST00000498412 377 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 SERF1AP1-201ENST00000514575 187 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 RNU6-1338P-201ENST00000516328 91 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 RNU7-149P-201ENST00000516739 59 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 RNU6-1153P-201ENST00000516760 105 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 RNU7-181P-201ENST00000517234 74 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 AC131055.1-201ENST00000584626 316 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 AC044792.1-201ENST00000593294 196 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 uc_338.4-201ENST00000616635 176 ntBASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CCDC197Q8NCU1 RNU6-1138P-201ENST00000365359 106 ntBASIC0.82□□□□□ -2.28
CCDC197Q8NCU1 Y_RNA.370-201ENST00000365589 108 ntBASIC0.82□□□□□ -2.28
CCDC197Q8NCU1 RNU6-639P-201ENST00000384074 107 ntBASIC0.82□□□□□ -2.28
CCDC197Q8NCU1 MIR570-201ENST00000384917 97 ntBASIC0.82□□□□□ -2.28
CCDC197Q8NCU1 snoU13.23-201ENST00000458863 104 ntBASIC0.82□□□□□ -2.28
CCDC197Q8NCU1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC197Q8NCU1 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
CCDC197Q8NCU1 AC109810.1-201ENST00000534066 224 ntBASIC0.82□□□□□ -2.28
CCDC197Q8NCU1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC197Q8NCU1 AC023827.1-201ENST00000569247 97 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms