Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 AL365222.1-201ENST00000614661 98 ntBASIC1.92□□□□□ -2.1
PNLDC1Q8NA58 AC009831.4-201ENST00000620744 325 ntBASIC1.92□□□□□ -2.1
PNLDC1Q8NA58 MIR6873-201ENST00000622788 63 ntBASIC1.92□□□□□ -2.1
PNLDC1Q8NA58 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PNLDC1Q8NA58 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 RNU6-888P-201ENST00000363010 101 ntBASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 SNORD68-201ENST00000363214 84 ntBASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 RNA5SP126-201ENST00000365092 109 ntBASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 SNORA4.2-201ENST00000365313 147 ntBASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 SNORD24-201ENST00000383884 75 ntBASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 SNORA48.3-201ENST00000391081 134 ntBASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 RNA5SP482-201ENST00000391269 118 ntBASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 RNU6-479P-201ENST00000516348 105 ntBASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 SNORA31.25-201ENST00000517242 134 ntBASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PNLDC1Q8NA58 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 RNU6-915P-201ENST00000364943 103 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 RNU6-296P-201ENST00000384608 107 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 MIR518F-201ENST00000384973 87 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 RNU6-1168P-201ENST00000390831 104 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 Y_RNA.584-201ENST00000391090 114 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 RNU2-51P-201ENST00000410708 197 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 Y_RNA.686-201ENST00000516548 134 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 RNU6-504P-201ENST00000516568 104 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 RNU7-28P-201ENST00000516759 62 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 RNA5SP437-201ENST00000517249 129 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 AL442644.1-201ENST00000454390 3105 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
PNLDC1Q8NA58 U8.1-201ENST00000362843 134 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 Y_RNA.71-201ENST00000362892 104 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 RNU6-112P-201ENST00000363599 104 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 SNORA22C-201ENST00000384614 134 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 MIR624-201ENST00000385217 97 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 RNA5SP338-201ENST00000410495 85 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 STAG3L5P-204ENST00000443759 179 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 RNA5SP200-201ENST00000516360 103 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 MIR514B-201ENST00000516774 80 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 RNU6-1234P-201ENST00000516877 103 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 RNU6-1270P-201ENST00000517128 108 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 AC090142.3-201ENST00000519012 385 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 AP001328.1-201ENST00000528550 176 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 AC131055.1-201ENST00000584626 316 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 AC006441.5-201ENST00000612680 209 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 TUG1_4.1-201ENST00000619464 181 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 MIR376A2-201ENST00000636782 80 ntBASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
PNLDC1Q8NA58 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 U8.2-201ENST00000363156 134 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 RNU6-268P-201ENST00000364174 107 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 Y_RNA.265-201ENST00000364677 108 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 Y_RNA.280-201ENST00000364765 112 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 RNA5SP138-201ENST00000365098 114 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 SNORA70B-201ENST00000384210 135 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 MIR891A-201ENST00000401237 79 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 RNA5SP270-201ENST00000411361 118 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 SNRPGP13-201ENST00000442212 177 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 SNORD45.4-201ENST00000516629 73 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 RNU7-193P-201ENST00000516723 65 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 Y_RNA.714-201ENST00000517065 90 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 RNU6-1116P-201ENST00000517269 99 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 U7.2-201ENST00000607576 63 ntBASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PNLDC1Q8NA58 Y_RNA.52-201ENST00000362760 96 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 RNU6-508P-201ENST00000363231 103 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 Y_RNA.120-201ENST00000363304 110 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 Y_RNA.127-201ENST00000363386 109 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 Y_RNA.261-201ENST00000364631 102 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 Y_RNA.294-201ENST00000364916 102 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 MIR539-201ENST00000365690 78 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 RNU6-1292P-201ENST00000383856 107 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 RNU6-1081P-201ENST00000384537 107 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 MIR221-201ENST00000385135 110 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 SNORD77.3-201ENST00000391113 65 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 RNA5SP127-201ENST00000411051 133 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 Z98742.3-201ENST00000418637 326 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 AC069257.2-201ENST00000441819 155 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 RNU6-717P-201ENST00000459076 104 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 RNU6-1211P-201ENST00000459179 105 ntBASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.87□□□□□ -2.11
PNLDC1Q8NA58 RPL23AP63-201ENST00000498752 471 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms