Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 AL603910.2-201ENST00000407268 136 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 MIR548H3-201ENST00000408771 118 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.26□□□□□ -2.21
RTL3Q8N8U3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.680-201ENST00000516441 93 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 RNU2-56P-201ENST00000516826 190 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 MIR4498-201ENST00000577599 66 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 MIR5692C2-201ENST00000577959 77 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 AC011921.3-201ENST00000605540 361 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 AC073349.3-201ENST00000617616 186 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 AL513423.1-201ENST00000621695 132 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 SNORD3E-202ENST00000627253 216 ntBASIC1.26□□□□□ -2.21
RTL3Q8N8U3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.26□□□□□ -2.21
RTL3Q8N8U3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.26□□□□□ -2.21
RTL3Q8N8U3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.122-201ENST00000363331 96 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 RNU6-211P-201ENST00000384047 107 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 RNU6-424P-201ENST00000384367 105 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 SNORA36B-201ENST00000410438 131 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 RNU6-651P-201ENST00000411040 105 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 BTF3P11-201ENST00000426582 477 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 STAG3L5P-204ENST00000443759 179 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.25□□□□□ -2.21
RTL3Q8N8U3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 AL591926.4-201ENST00000616895 298 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 AC134026.1-201ENST00000623249 2239 ntBASIC1.25□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.117-201ENST00000363294 101 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.478-201ENST00000384358 107 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.539-201ENST00000384635 107 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 MT-TG-201ENST00000387429 68 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 MTCO2P33-201ENST00000402100 465 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 AC015922.2-201ENST00000435593 184 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.24□□□□□ -2.21
RTL3Q8N8U3 AC233266.1-201ENST00000454518 96 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 RNU6-437P-201ENST00000459408 95 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 HMGN1P7-201ENST00000491722 313 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 RNU6-1023P-201ENST00000516137 106 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 AC090821.2-201ENST00000523552 176 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.24□□□□□ -2.21
RTL3Q8N8U3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.24□□□□□ -2.21
RTL3Q8N8U3 MIR5688-201ENST00000580619 83 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 AL021707.8-201ENST00000609428 183 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 AC242852.1-201ENST00000612151 96 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 AC244015.1-201ENST00000622301 99 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 AL442644.1-201ENST00000454390 3105 ntBASIC1.24□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.23□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.238-201ENST00000364441 102 ntBASIC1.23□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.23□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.307-201ENST00000365022 117 ntBASIC1.23□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.447-201ENST00000384184 113 ntBASIC1.23□□□□□ -2.21
RTL3Q8N8U3 MIR522-201ENST00000385071 87 ntBASIC1.23□□□□□ -2.21
RTL3Q8N8U3 MIR526A2-201ENST00000390198 65 ntBASIC1.23□□□□□ -2.21
RTL3Q8N8U3 MIR1278-201ENST00000408753 81 ntBASIC1.23□□□□□ -2.21
RTL3Q8N8U3 RPL23AP54-201ENST00000495129 419 ntBASIC1.23□□□□□ -2.21
RTL3Q8N8U3 MIR3128-201ENST00000581957 66 ntBASIC1.23□□□□□ -2.21
RTL3Q8N8U3 BX284668.6-201ENST00000606899 438 ntBASIC1.23□□□□□ -2.21
RTL3Q8N8U3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.23□□□□□ -2.21
RTL3Q8N8U3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.76-201ENST00000362931 109 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 RNU6-1205P-201ENST00000363625 106 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 RNY1-201ENST00000364228 113 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 Y_RNA.304-201ENST00000365011 112 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 MIR660-201ENST00000385235 97 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 U8.16-201ENST00000391279 133 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 CALM2P4-201ENST00000430810 426 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 SNORD11-201ENST00000459124 84 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 AL133373.1-201ENST00000497098 94 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 RNA5SP168-201ENST00000516642 112 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 AC100767.1-201ENST00000528178 123 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 AC027279.3-201ENST00000625055 122 ntBASIC1.22□□□□□ -2.21
RTL3Q8N8U3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
RTL3Q8N8U3 MIR337-201ENST00000362281 93 ntBASIC1.21□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.277-201ENST00000364754 102 ntBASIC1.21□□□□□ -2.22
RTL3Q8N8U3 MIR2681-201ENST00000581814 105 ntBASIC1.21□□□□□ -2.22
RTL3Q8N8U3 AL359821.1-201ENST00000605519 182 ntBASIC1.21□□□□□ -2.22
RTL3Q8N8U3 MIR6078-201ENST00000611069 100 ntBASIC1.21□□□□□ -2.22
RTL3Q8N8U3 AC106754.2-201ENST00000623006 233 ntBASIC1.21□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.60-201ENST00000362831 98 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 RNU6-653P-201ENST00000363074 106 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 RNU6-833P-201ENST00000363486 107 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 RNU6-1209P-201ENST00000363655 107 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.401-201ENST00000383965 117 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.590-201ENST00000410140 107 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.618-201ENST00000410949 107 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 RNA5SP247-201ENST00000411181 105 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.2□□□□□ -2.22
RTL3Q8N8U3 AC092991.1-201ENST00000477176 376 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 NDUFA4P2-201ENST00000489989 244 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 CYCTP-201ENST00000504253 315 ntBASIC1.2□□□□□ -2.22
RTL3Q8N8U3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms