Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 UQCRHP3-201ENST00000451503 251 ntBASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 AC025518.1-201ENST00000479856 347 ntBASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 RNA5SP281-201ENST00000516504 135 ntBASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 MIR4658-201ENST00000584344 65 ntBASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 U1.36-201ENST00000620684 176 ntBASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DEPDC4Q8N2C3 RNU1-109P-201ENST00000383960 147 ntBASIC3.01□□□□□ -1.93
DEPDC4Q8N2C3 RNU6-756P-201ENST00000383997 107 ntBASIC3.01□□□□□ -1.93
DEPDC4Q8N2C3 RNU6-296P-201ENST00000384608 107 ntBASIC3.01□□□□□ -1.93
DEPDC4Q8N2C3 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
DEPDC4Q8N2C3 MIR548D2-201ENST00000384955 97 ntBASIC3.01□□□□□ -1.93
DEPDC4Q8N2C3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.01□□□□□ -1.93
DEPDC4Q8N2C3 RNU2-7P-201ENST00000410794 178 ntBASIC3.01□□□□□ -1.93
DEPDC4Q8N2C3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
DEPDC4Q8N2C3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
DEPDC4Q8N2C3 MIR302B-201ENST00000362188 73 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 RNU4-35P-201ENST00000362588 141 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 SNORA51.5-201ENST00000384126 131 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 SNORA70.7-201ENST00000384159 133 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 MIR490-201ENST00000384865 128 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 MIR128-1-201ENST00000384921 82 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 MIR136-201ENST00000385207 82 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 MT-TI-201ENST00000387365 69 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 RNA5SP120-201ENST00000410900 112 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3□□□□□ -1.93
DEPDC4Q8N2C3 RN7SL75P-201ENST00000461926 281 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 RPL23AP63-201ENST00000498752 471 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 RPL23AP94-201ENST00000512518 302 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 RNU2-35P-201ENST00000516446 142 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 RNA5SP437-201ENST00000517249 129 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 SNORA31.26-201ENST00000517250 137 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 RNU6-537P-201ENST00000517277 103 ntBASIC3□□□□□ -1.93
DEPDC4Q8N2C3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3□□□□□ -1.93
DEPDC4Q8N2C3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3□□□□□ -1.93
DEPDC4Q8N2C3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
DEPDC4Q8N2C3 AC093831.2-201ENST00000624393 3427 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 SNORA38.1-201ENST00000364172 131 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 U8.9-201ENST00000365667 134 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 RNA5SP144-201ENST00000410846 116 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 RNA5SP501-201ENST00000410990 112 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 SNX2P2-201ENST00000424553 323 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 MIR4709-201ENST00000577272 72 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 MIR5009-201ENST00000578736 100 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 AC006254.2-201ENST00000603259 279 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 MIR6852-201ENST00000621699 66 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 AL035425.3-201ENST00000564206 4996 ntBASIC2.99□□□□□ -1.93
DEPDC4Q8N2C3 RNU1-33P-201ENST00000364249 162 ntBASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 RNU6-1104P-201ENST00000384723 104 ntBASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 RNU6-893P-201ENST00000458841 100 ntBASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 snoU13.27-201ENST00000459278 104 ntBASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 RNU7-181P-201ENST00000517234 74 ntBASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 AC068339.1-201ENST00000526965 141 ntBASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 MIR3124-201ENST00000582636 67 ntBASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 YPEL5P2-201ENST00000605553 359 ntBASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 MIR8057-201ENST00000620957 69 ntBASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 AC021613.1-201ENST00000623880 111 ntBASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
DEPDC4Q8N2C3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 MIR342-201ENST00000362212 99 ntBASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 Y_RNA.78-201ENST00000362970 110 ntBASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 U8.6-201ENST00000364939 135 ntBASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 Y_RNA.494-201ENST00000384432 111 ntBASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 MIR660-201ENST00000385235 97 ntBASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 SNORD17-201ENST00000390930 237 ntBASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 RNA5SP270-201ENST00000411361 118 ntBASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 AC005326.1-201ENST00000429197 123 ntBASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 UBL5P3-201ENST00000475112 231 ntBASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 AC021506.2-201ENST00000612354 169 ntBASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
DEPDC4Q8N2C3 AC009487.2-201ENST00000420969 6821 ntBASIC2.96□□□□□ -1.94
DEPDC4Q8N2C3 Y_RNA.344-201ENST00000365381 112 ntBASIC2.96□□□□□ -1.94
DEPDC4Q8N2C3 Y_RNA.369-201ENST00000365568 117 ntBASIC2.96□□□□□ -1.94
DEPDC4Q8N2C3 Y_RNA.544-201ENST00000384650 113 ntBASIC2.96□□□□□ -1.94
DEPDC4Q8N2C3 AL022718.1-201ENST00000412004 84 ntBASIC2.96□□□□□ -1.94
DEPDC4Q8N2C3 RNU7-34P-201ENST00000459394 64 ntBASIC2.96□□□□□ -1.94
DEPDC4Q8N2C3 MIR4276-201ENST00000584832 70 ntBASIC2.96□□□□□ -1.94
DEPDC4Q8N2C3 AP001318.4-201ENST00000616637 121 ntBASIC2.96□□□□□ -1.94
DEPDC4Q8N2C3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.96□□□□□ -1.94
DEPDC4Q8N2C3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.96□□□□□ -1.94
DEPDC4Q8N2C3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 Y_RNA.370-201ENST00000365589 108 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 SNORA24-201ENST00000384096 131 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 RNA5SP229-201ENST00000410809 99 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 RNU2-11P-201ENST00000459191 187 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 UBE2DNL-203ENST00000474922 222 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 RNU2-13P-201ENST00000515909 113 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 SNORA31.4-201ENST00000516049 129 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 RN7SKP43-201ENST00000516173 320 ntBASIC2.95□□□□□ -1.94
DEPDC4Q8N2C3 RNU7-53P-201ENST00000516705 60 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms