Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 HMGN2P32-201ENST00000444648 269 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 SNORD11-201ENST00000459124 84 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 Y_RNA.680-201ENST00000516441 93 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 SNORD45.4-201ENST00000516629 73 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 MIR4498-201ENST00000577599 66 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 MIR4778-201ENST00000577635 80 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 MIR4422-201ENST00000581938 83 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 AL365265.1-201ENST00000621045 234 ntBASIC1.47□□□□□ -2.17
BEST3Q8N1M1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.47□□□□□ -2.17
BEST3Q8N1M1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.47□□□□□ -2.17
BEST3Q8N1M1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
BEST3Q8N1M1 Y_RNA.60-201ENST00000362831 98 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 RNU6-199P-201ENST00000362954 107 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 Y_RNA.188-201ENST00000363952 111 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 SNORD50B-201ENST00000364995 70 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 MT-TG-201ENST00000387429 68 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.46□□□□□ -2.18
BEST3Q8N1M1 NDUFA4P2-201ENST00000489989 244 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.46□□□□□ -2.18
BEST3Q8N1M1 AC079140.2-201ENST00000506193 142 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 RNU4-71P-201ENST00000516258 113 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 AC100767.1-201ENST00000528178 123 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 AL645939.4-201ENST00000604495 135 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 BX248123.2-201ENST00000606318 124 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 snoU13.31-201ENST00000607291 104 ntBASIC1.46□□□□□ -2.18
BEST3Q8N1M1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
BEST3Q8N1M1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
BEST3Q8N1M1 WWP1P1-201ENST00000466609 2769 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 Y_RNA.24-201ENST00000362508 103 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 RNU4-10P-201ENST00000364383 140 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 Y_RNA.262-201ENST00000364641 102 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 Y_RNA.269-201ENST00000364685 89 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 AP1B1P2-201ENST00000416196 106 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.45□□□□□ -2.18
BEST3Q8N1M1 AC093850.1-201ENST00000454121 251 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 SNORD116-28-201ENST00000516123 91 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 AP000942.4-201ENST00000604811 241 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 AL021707.8-201ENST00000609428 183 ntBASIC1.45□□□□□ -2.18
BEST3Q8N1M1 SNORD14E-201ENST00000364009 85 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 RNU6-60P-201ENST00000364792 103 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 RNY4P28-201ENST00000365281 93 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 RNU6-997P-201ENST00000384725 107 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 MIR802-201ENST00000390235 94 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 SNORA67.6-201ENST00000391093 99 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.44□□□□□ -2.18
BEST3Q8N1M1 AC245517.4-201ENST00000448601 281 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 COX6CP14-201ENST00000469580 174 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 RNU6-1271P-201ENST00000517049 105 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 RNU6-111P-201ENST00000517179 105 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 AC011921.3-201ENST00000605540 361 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 AL512598.1-201ENST00000610158 273 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 uc_338.4-201ENST00000616635 176 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 AC106754.2-201ENST00000623006 233 ntBASIC1.44□□□□□ -2.18
BEST3Q8N1M1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
BEST3Q8N1M1 RNU6-653P-201ENST00000363074 106 ntBASIC1.43□□□□□ -2.18
BEST3Q8N1M1 SNORA2.2-201ENST00000365473 135 ntBASIC1.43□□□□□ -2.18
BEST3Q8N1M1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.43□□□□□ -2.18
BEST3Q8N1M1 MIR452-201ENST00000385020 85 ntBASIC1.43□□□□□ -2.18
BEST3Q8N1M1 MIR1323-201ENST00000408090 73 ntBASIC1.43□□□□□ -2.18
BEST3Q8N1M1 SNX2P2-201ENST00000424553 323 ntBASIC1.43□□□□□ -2.18
BEST3Q8N1M1 AC027119.1-201ENST00000440877 241 ntBASIC1.43□□□□□ -2.18
BEST3Q8N1M1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.43□□□□□ -2.18
BEST3Q8N1M1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.43□□□□□ -2.18
BEST3Q8N1M1 AC008507.4-201ENST00000585464 127 ntBASIC1.43□□□□□ -2.18
BEST3Q8N1M1 RNY1-201ENST00000364228 113 ntBASIC1.42□□□□□ -2.18
BEST3Q8N1M1 Y_RNA.229-201ENST00000364347 113 ntBASIC1.42□□□□□ -2.18
BEST3Q8N1M1 RNU6-442P-201ENST00000383968 104 ntBASIC1.42□□□□□ -2.18
BEST3Q8N1M1 MIR1298-201ENST00000408783 112 ntBASIC1.42□□□□□ -2.18
BEST3Q8N1M1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.42□□□□□ -2.18
BEST3Q8N1M1 RNU7-95P-201ENST00000459222 64 ntBASIC1.42□□□□□ -2.18
BEST3Q8N1M1 RNU6-322P-201ENST00000516010 103 ntBASIC1.42□□□□□ -2.18
BEST3Q8N1M1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.42□□□□□ -2.18
BEST3Q8N1M1 MIR3937-201ENST00000580135 106 ntBASIC1.42□□□□□ -2.18
BEST3Q8N1M1 AL049861.1-201ENST00000603130 150 ntBASIC1.42□□□□□ -2.18
BEST3Q8N1M1 AL513534.2-201ENST00000603836 250 ntBASIC1.42□□□□□ -2.18
BEST3Q8N1M1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
BEST3Q8N1M1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.42□□□□□ -2.18
BEST3Q8N1M1 RNU4-17P-201ENST00000365598 141 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 Y_RNA.476-201ENST00000384347 108 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 Y_RNA.572-201ENST00000384757 98 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 MIR653-201ENST00000385279 96 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 AC092991.1-201ENST00000477176 376 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 RNA5SP445-201ENST00000515889 115 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 AC019176.1-201ENST00000518519 225 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 AC090049.2-201ENST00000550377 109 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 MIR4285-201ENST00000581001 85 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 AL365434.2-201ENST00000607979 234 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.41□□□□□ -2.18
BEST3Q8N1M1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.18
BEST3Q8N1M1 Y_RNA.4-201ENST00000362333 112 ntBASIC1.4□□□□□ -2.19
BEST3Q8N1M1 Y_RNA.164-201ENST00000363709 102 ntBASIC1.4□□□□□ -2.19
BEST3Q8N1M1 RNU6-1138P-201ENST00000365359 106 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms